Detailed information NTG0651856

Bioinformatically predicted

Overview

• Name: recB
• Type: Machinery gene
• Locus tag: LVJ86_RS03170
• Genome accession: NZ_CP091510
• Coordinates: 706934..710578 (-)
• Length: 1214 a.a.
• NCBI ID: WP_047761156.1
• Uniprot ID: -
• Organism: Neisseria arctica strain KH1503
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 701934..715578

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LVJ86_RS03160 (LVJ86_03160)	-	702563..703252 (-)	690	WP_047761154.1	energy-coupling factor ABC transporter permease	-
LVJ86_RS03165 (LVJ86_03165)	-	703520..706729 (+)	3210	WP_047761155.1	DNA translocase FtsK	-
LVJ86_RS03170 (LVJ86_03170)	recB	706934..710578 (-)	3645	WP_047761156.1	exodeoxyribonuclease V subunit beta	Machinery gene
LVJ86_RS03175 (LVJ86_03175)	-	710881..711558 (+)	678	WP_047761157.1	CsgG/HfaB family protein	-
LVJ86_RS03180 (LVJ86_03180)	-	711591..711947 (+)	357	WP_047761158.1	DUF4810 domain-containing protein	-
LVJ86_RS03185 (LVJ86_03185)	-	711944..712606 (+)	663	WP_047761159.1	DUF799 domain-containing protein	-
LVJ86_RS03190 (LVJ86_03190)	-	712709..713353 (-)	645	WP_047761160.1	DedA family protein	-
LVJ86_RS03195 (LVJ86_03195)	hda	713552..714220 (+)	669	WP_047761186.1	DnaA regulatory inactivator Hda	-
LVJ86_RS03200 (LVJ86_03200)	-	714217..714885 (+)	669	WP_047761161.1	HAD family hydrolase	-
LVJ86_RS03205 (LVJ86_03205)	cutA	714898..715221 (+)	324	WP_047761162.1	divalent-cation tolerance protein CutA	-

Sequence

Protein

• Length: 1214 a.a.
• Molecular weight: 137671.41 Da
• Isoelectric Point: 5.8011

>NTDB_id=651856 LVJ86_RS03170 WP_047761156.1 706934..710578(-) (recB) [Neisseria arctica strain KH1503]
MMFQTQPFNALTIPIERTNLIEASAGTGKTYGIAALFTRLIVLEKMAVERILVVTFTKAATAELKTRLRARLEDALEVLE
TLTPGIELIRHDTDYQALHTLYRQYRRQEEAPDDFIFKLLAEALKKENLPRLVIRLKAAIADFDSAAIFTIHGFCQRLLR
DYAFLCQVPFDTELTEQNDERLLLPAQDFWRTRIANNPTLARLVYEHKYTPQNMLASLRRFLNRPHLNFRRPNADLDKIE
AELHTCWQDVRNRLPELIRIFWNVRPTLNGNSYRESTFKELFAELQYAADNGLIPGDSKGKLADLDAEILQSKLKKGQTA
NHEAFKQLHILAELGRLKTAHEEAATAVLTALQIDMLVYLNQAQAEYKKSNRERDFDDLLIDVHNALNESPLGHTFAKTV
AENWQVALIDEFQDTDPLQYGIFRDIFIRHGNPLFLVGDPKQAIYSFRGADIYAYLQAAKDAEYHYTLDINYRSHTALVD
GISALFNQKQRPFVLEDLDFAEVRAQRNESRLDPPQNVIRIRWLHGNETEAVSKEVLRRRAADYCADEIAGILNQAETGR
LNFQGEPLQSGHIAVLVRTHNEGHMIAGALKARNVQSVLIYHDSVFAAEEAAALAALISFWLQPQRTELLRFVLSSVLFG
FTAADLHTLNQSEAELSEWIHSAETAAQQWQQHGFYAAMQAFSSRHGIETHLLASGNERSLTNYHQLLEKLAEEDEQSHT
PAALLQWLQAQIQSAHSGKSAKSNILRLESDEALVKIVTIHASKGLEYPLVFCPFIWDAAKNTPDDWQVLHTPSGGTELL
AKHQLDSSNEQQLADETASENLRLLYVALTRAAEQLTIYAGYCNNTPDNTFAYLLEGTPQTSREDTAAAYMAERKSNKAA
GEMQMFYRNWQSFVQKHPDSGIALCNDIPPPAVYHANNSTQGNYQAHILPERIFEFIRHTSFTGLSRTTPAHDYEYSELQ
PTLDPAEAGLSNLPVSGTDTAEADSIFDFPRGAAAGICLHELLEKFNFNLSAVEQTELIRTTLAKHSFDAEYWYSSIASM
LEHTRRTQLTGKYALADIPTKQRLPEMGFVLHMEDFKLPHIRTWLAQDHIRLPQVCIDAAALLDFSDVKGFLNGFIDMVY
QDSDGHVCIIDYKSNHLGNSSNDYSAENMDTAMAEHHYYLQALIYAIATARYFKQRGRPLQTVAVRYLFLRGLNNNGNGV
WSWDIDTADLAPWL

Nucleotide

• Length: 3645 bp

>NTDB_id=651856 LVJ86_RS03170 WP_047761156.1 706934..710578(-) (recB) [Neisseria arctica strain KH1503]
ATGATGTTCCAAACCCAACCCTTCAACGCACTGACTATTCCCATCGAAAGAACCAACCTGATCGAAGCCTCTGCGGGCAC
TGGTAAAACCTACGGCATAGCAGCCCTTTTTACCCGCCTGATTGTGCTTGAAAAAATGGCTGTGGAAAGAATCTTAGTCG
TTACCTTCACAAAAGCTGCCACCGCCGAACTGAAAACCCGCCTGCGCGCACGGTTGGAAGACGCATTAGAAGTATTGGAA
ACATTAACCCCCGGCATCGAACTGATCCGTCACGATACCGACTATCAAGCACTGCACACCCTCTACCGGCAATACCGCCG
GCAAGAAGAGGCTCCCGATGATTTTATATTCAAGCTGCTTGCCGAAGCTTTGAAAAAAGAAAACCTGCCTCGGCTGGTTA
TCCGTTTGAAAGCCGCCATTGCCGATTTCGACAGTGCGGCCATTTTCACCATACACGGTTTCTGCCAACGGCTTTTGCGC
GATTACGCTTTTCTATGCCAAGTACCCTTCGATACCGAGCTTACCGAGCAAAACGACGAGCGCCTACTTCTACCCGCCCA
AGATTTTTGGCGCACCCGTATTGCGAACAATCCCACCTTGGCACGTTTGGTATATGAACACAAATATACTCCGCAAAACA
TGCTGGCATCATTGCGCCGGTTTCTCAACCGCCCCCATCTGAATTTCAGACGGCCCAATGCCGACTTAGATAAAATTGAA
GCGGAATTACACACCTGCTGGCAGGATGTCCGCAACCGACTGCCCGAACTTATCCGTATTTTCTGGAATGTCCGTCCTAC
GCTAAACGGTAACAGCTACCGTGAAAGCACATTTAAAGAACTGTTCGCCGAATTGCAATATGCGGCTGATAACGGTCTGA
TTCCCGGAGATTCCAAAGGCAAATTGGCTGATCTGGATGCCGAAATACTACAAAGTAAGCTAAAGAAAGGCCAAACTGCC
AACCACGAAGCATTTAAGCAACTGCATATATTGGCCGAACTAGGCCGTCTGAAAACAGCGCACGAAGAAGCCGCAACGGC
CGTTCTCACCGCCTTGCAAATAGATATGCTGGTTTACCTTAACCAGGCACAGGCCGAATACAAAAAATCCAACCGGGAAC
GCGACTTTGATGATCTGCTGATTGATGTCCACAATGCTCTCAACGAAAGCCCTCTTGGACATACCTTTGCAAAAACGGTA
GCAGAGAACTGGCAAGTAGCCCTGATAGACGAATTCCAAGATACCGACCCACTACAATACGGCATCTTCCGTGATATTTT
TATCCGGCACGGCAACCCTCTATTTTTGGTGGGCGACCCCAAACAGGCTATTTACAGCTTTCGCGGTGCCGATATTTATG
CCTATCTGCAGGCAGCCAAAGATGCCGAATATCACTATACGCTCGATATAAACTATCGAAGCCACACGGCCTTGGTAGAC
GGCATCAGTGCATTGTTTAACCAAAAGCAACGCCCGTTTGTACTCGAAGACCTTGATTTTGCAGAGGTCCGCGCGCAACG
TAACGAAAGCAGGCTGGATCCGCCGCAAAATGTCATCCGCATCCGCTGGCTGCACGGCAATGAAACCGAAGCCGTCAGTA
AAGAAGTCCTACGCCGCAGGGCGGCCGATTATTGTGCCGATGAAATCGCCGGTATCCTAAACCAAGCCGAAACAGGCCGT
CTGAACTTTCAAGGAGAGCCGCTGCAATCCGGCCATATCGCCGTGCTCGTACGCACCCACAACGAAGGGCATATGATAGC
CGGAGCGCTCAAAGCCCGAAACGTTCAGAGCGTATTAATCTACCACGATTCGGTATTTGCAGCCGAAGAGGCCGCTGCCC
TTGCGGCTCTGATCTCCTTTTGGCTTCAACCCCAACGTACCGAGCTTTTAAGATTTGTATTGAGCAGCGTCCTTTTCGGT
TTTACTGCTGCCGACCTACACACCCTAAACCAAAGCGAAGCCGAATTATCCGAGTGGATACATTCGGCCGAAACGGCCGC
ACAACAATGGCAACAACACGGTTTTTACGCCGCCATGCAGGCTTTTTCCTCCCGCCACGGTATAGAAACCCATCTGCTTG
CCTCCGGTAACGAACGCAGCCTTACTAATTATCATCAGCTTCTGGAAAAACTGGCCGAAGAAGACGAACAAAGCCACACG
CCCGCTGCACTGCTCCAATGGCTTCAGGCACAAATTCAAAGCGCACATAGCGGTAAATCTGCCAAAAGCAACATCCTACG
TTTGGAAAGCGACGAAGCACTGGTCAAAATCGTCACCATCCATGCCTCAAAAGGATTGGAGTATCCGCTGGTGTTCTGCC
CTTTTATTTGGGATGCGGCTAAAAACACTCCGGATGATTGGCAGGTTTTACACACGCCCTCCGGCGGCACCGAATTACTG
GCCAAACACCAGCTCGACAGCAGCAACGAACAACAATTAGCCGATGAAACCGCCTCGGAAAACCTGCGTCTTTTATATGT
AGCCCTTACCCGTGCTGCGGAACAGCTAACCATCTATGCAGGCTATTGCAACAATACGCCCGATAATACTTTTGCCTATT
TATTGGAAGGTACGCCGCAAACAAGCCGTGAAGACACGGCCGCTGCATATATGGCCGAAAGAAAAAGCAACAAAGCCGCC
GGAGAAATGCAGATGTTTTATCGGAATTGGCAAAGCTTTGTGCAAAAACACCCCGATAGCGGTATTGCCTTATGCAACGA
TATCCCGCCTCCCGCCGTTTACCACGCAAACAACAGCACACAAGGCAACTATCAGGCACATATTCTGCCTGAACGCATAT
TCGAATTTATCCGACATACCAGCTTTACCGGCTTAAGCAGAACCACCCCCGCCCACGACTACGAATACAGCGAACTGCAA
CCCACGCTCGACCCCGCCGAAGCAGGCTTGTCCAACCTGCCCGTATCCGGCACCGATACTGCCGAAGCCGACAGCATCTT
CGATTTCCCACGCGGTGCGGCTGCCGGTATCTGCCTGCATGAACTACTTGAGAAATTTAATTTCAATCTTTCCGCCGTCG
AACAAACTGAATTGATCCGCACCACGTTAGCCAAACACAGCTTTGATGCGGAGTATTGGTATTCTTCTATTGCGTCCATG
CTCGAACATACCCGCCGAACACAGCTCACGGGGAAATACGCCTTGGCCGATATACCAACCAAACAGCGTTTGCCCGAAAT
GGGGTTTGTATTGCACATGGAGGATTTCAAACTACCGCATATCCGAACATGGTTGGCCCAAGACCACATACGTTTGCCGC
AGGTGTGCATTGATGCCGCCGCACTACTCGACTTCAGCGACGTAAAAGGTTTTTTGAACGGCTTTATCGATATGGTCTAT
CAGGATTCAGACGGCCATGTCTGCATTATCGACTACAAATCCAATCACTTAGGCAATAGCAGCAATGATTACAGCGCAGA
GAATATGGATACCGCCATGGCCGAGCACCACTATTATCTTCAAGCCCTCATTTACGCCATTGCCACTGCGCGTTATTTCA
AACAACGCGGCCGCCCGCTGCAAACGGTTGCTGTCCGCTATCTGTTTTTACGCGGCCTGAACAATAACGGCAACGGCGTA
TGGTCTTGGGATATCGATACGGCCGATCTTGCGCCCTGGCTTTGA

Domains

Predicted by InterproScan.

• UvrD/REP helicase N-terminal domain (UvrD-helicase) (6-462)

• UvrD-like helicase C-terminal domain (UvrD_C) (466-838)

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (994-1191)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recB	Neisseria gonorrhoeae strain FA1090	56.343	100	0.563