Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LVJ83_RS02775 Genome accession   NZ_CP091508
Coordinates   617228..617683 (-) Length   151 a.a.
NCBI ID   WP_244786100.1    Uniprot ID   -
Organism   Uruburuella testudinis strain CCUG 63373m     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 612228..622683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LVJ83_RS02760 (LVJ83_02760) - 614317..614514 (+) 198 WP_244786094.1 hypothetical protein -
  LVJ83_RS02765 (LVJ83_02765) prpC 614524..615675 (-) 1152 WP_244786096.1 2-methylcitrate synthase -
  LVJ83_RS02770 (LVJ83_02770) prpB 615819..616700 (-) 882 WP_244786098.1 methylisocitrate lyase -
  LVJ83_RS02775 (LVJ83_02775) recX 617228..617683 (-) 456 WP_244786100.1 recombination regulator RecX Regulator
  LVJ83_RS02780 (LVJ83_02780) - 617952..618665 (-) 714 WP_244786102.1 phosphoglycolate phosphatase -
  LVJ83_RS02785 (LVJ83_02785) uhpT 618785..620182 (-) 1398 WP_244786104.1 hexose-6-phosphate:phosphate antiporter -
  LVJ83_RS02790 (LVJ83_02790) - 620633..621850 (-) 1218 WP_244786106.1 aspartate kinase -
  LVJ83_RS02795 (LVJ83_02795) - 622180..622530 (+) 351 WP_244786108.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 151 a.a.        Molecular weight: 17384.77 Da        Isoelectric Point: 9.8730

>NTDB_id=651772 LVJ83_RS02775 WP_244786100.1 617228..617683(-) (recX) [Uruburuella testudinis strain CCUG 63373m]
MKPEKSLRARAMDILSRREISRAELKRKLAPYAESEEEIESVLNEFAERHWQSDTRYAEAYIHSKSRQHGKLRLKQALAA
KGVSEEITRALMPDRDTEQAAAIAVLRKKFKQPAADLQEKQKQARFLAYRGFDMDVIHSALKTAWDETAAD

Nucleotide


Download         Length: 456 bp        

>NTDB_id=651772 LVJ83_RS02775 WP_244786100.1 617228..617683(-) (recX) [Uruburuella testudinis strain CCUG 63373m]
ATGAAACCCGAAAAATCCCTACGCGCCCGCGCCATGGATATCCTCTCCCGCCGCGAAATCAGCCGCGCCGAACTCAAACG
CAAGCTGGCGCCTTATGCAGAAAGCGAAGAGGAAATCGAAAGCGTGTTAAACGAATTTGCCGAACGCCATTGGCAGTCCG
ACACACGCTATGCCGAGGCCTATATCCACAGCAAAAGCCGCCAACACGGCAAACTGCGGCTCAAACAGGCCTTGGCGGCC
AAAGGCGTCAGCGAAGAAATCACCCGTGCACTGATGCCCGACCGCGATACCGAGCAAGCCGCCGCAATTGCTGTATTGCG
CAAAAAATTCAAACAGCCCGCCGCCGATTTACAGGAAAAACAAAAGCAGGCGCGCTTTCTCGCCTATCGCGGTTTTGATA
TGGACGTGATTCACAGCGCCTTGAAAACCGCTTGGGATGAAACCGCAGCGGATTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(34-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

74.834

100

0.748