Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LVJ78_RS10410 Genome accession   NZ_CP091507
Coordinates   2287744..2288199 (+) Length   151 a.a.
NCBI ID   WP_132952912.1    Uniprot ID   A0AAE9KGN3
Organism   Uruburuella suis strain 1258/02     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2282744..2293199
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LVJ78_RS10395 (LVJ78_10395) - 2283514..2284731 (+) 1218 WP_132952908.1 aspartate kinase -
  LVJ78_RS10400 (LVJ78_10400) uhpT 2285214..2286614 (+) 1401 WP_243650325.1 hexose-6-phosphate:phosphate antiporter -
  LVJ78_RS10405 (LVJ78_10405) - 2286743..2287456 (+) 714 WP_132952910.1 phosphoglycolate phosphatase -
  LVJ78_RS10410 (LVJ78_10410) recX 2287744..2288199 (+) 456 WP_132952912.1 recombination regulator RecX Regulator
  LVJ78_RS10415 (LVJ78_10415) prpB 2288740..2289621 (+) 882 WP_132952914.1 methylisocitrate lyase -
  LVJ78_RS10420 (LVJ78_10420) prpC 2289749..2290903 (+) 1155 WP_132952916.1 2-methylcitrate synthase -

Sequence

Protein


Download         Length: 151 a.a.        Molecular weight: 17187.80 Da        Isoelectric Point: 10.1186

>NTDB_id=651761 LVJ78_RS10410 WP_132952912.1 2287744..2288199(+) (recX) [Uruburuella suis strain 1258/02]
MKPEKSLRTRAMEILSRREISRAELKRKLAPHADSEEEIEKVLAEFAERQWQSDARYAEAYVHSKSRQHGALRLKQALLA
KGVSGELIQPLLPAPDAERQAAIAVLRKKFKQPAADLAGKQKQMRFLAYRGFDMEIIHAAIKSDWAEAPEE

Nucleotide


Download         Length: 456 bp        

>NTDB_id=651761 LVJ78_RS10410 WP_132952912.1 2287744..2288199(+) (recX) [Uruburuella suis strain 1258/02]
ATGAAACCCGAAAAATCCCTGCGCACACGCGCCATGGAAATTTTATCCCGCCGCGAAATCAGCCGCGCCGAGCTCAAACG
CAAGCTCGCCCCTCATGCCGATAGCGAAGAAGAAATCGAAAAAGTGCTGGCCGAATTTGCCGAGCGCCAATGGCAATCGG
ATGCACGCTATGCCGAAGCCTATGTGCACAGCAAAAGCCGCCAACACGGCGCACTCAGGCTCAAGCAGGCGCTCTTAGCC
AAAGGCGTGTCCGGCGAGCTTATCCAGCCACTGCTGCCTGCGCCCGATGCCGAACGGCAAGCCGCCATTGCCGTGCTGCG
CAAAAAATTCAAACAACCGGCCGCCGATTTGGCCGGCAAGCAAAAGCAGATGCGTTTTCTCGCTTATCGCGGCTTCGACA
TGGAAATTATCCATGCCGCCATCAAAAGCGATTGGGCAGAAGCGCCGGAAGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

66.225

100

0.662