Detailed information NTG0065174

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7R16_RS20945
• Genome accession: NZ_AP022030
• Coordinates: 4362714..4363739 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain WP3-S18-ESBL-07
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4357714..4368739

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R16_RS20925 (WP3S18E07_40540)	metJ	4358775..4359092 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
H7R16_RS20930 (WP3S18E07_40550)	yiiX	4359276..4359884 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
H7R16_RS20935 (WP3S18E07_40560)	rpmE	4359945..4360157 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7R16_RS20940 (WP3S18E07_40570)	priA	4360360..4362558 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
H7R16_RS20945 (WP3S18E07_40580)	cytR	4362714..4363739 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
H7R16_RS20950 (WP3S18E07_40590)	ftsN	4363831..4364790 (+)	960	WP_000068828.1	cell division protein FtsN	-
H7R16_RS20955 (WP3S18E07_40600)	hslV	4364883..4365413 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7R16_RS20960 (WP3S18E07_40610)	hslU	4365423..4366754 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
H7R16_RS20965 (WP3S18E07_40620)	menA	4366821..4367747 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7R16_RS20970 (WP3S18E07_40630)	rraA	4367840..4368325 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7R16_RS20975 (WP3S18E07_40640)	zapB	4368410..4368655 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=65174 H7R16_RS20945 WP_000644904.1 4362714..4363739(+) (cytR) [Escherichia coli strain WP3-S18-ESBL-07]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=65174 H7R16_RS20945 WP_000644904.1 4362714..4363739(+) (cytR) [Escherichia coli strain WP3-S18-ESBL-07]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628