Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   L3070_RS07935 Genome accession   NZ_CP091492
Coordinates   1661038..1661664 (+) Length   208 a.a.
NCBI ID   WP_033145121.1    Uniprot ID   A0A263VSI0
Organism   Enterobacter cloacae complex sp. ECL405     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1656038..1666664
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L3070_RS07915 (L3070_07915) - 1656438..1658198 (-) 1761 WP_094934908.1 Lon protease family protein -
  L3070_RS07920 (L3070_07920) matP 1658385..1658837 (+) 453 WP_032658161.1 macrodomain Ter protein MatP -
  L3070_RS07925 (L3070_07925) ompA 1658901..1659956 (-) 1056 WP_023311028.1 porin OmpA -
  L3070_RS07930 (L3070_07930) sulA 1660311..1660820 (-) 510 WP_033145120.1 SOS-induced cell division inhibitor SulA -
  L3070_RS07935 (L3070_07935) sxy/tfoX 1661038..1661664 (+) 627 WP_033145121.1 TfoX/Sxy family DNA transformation protein Regulator
  L3070_RS07940 (L3070_07940) yccS 1661621..1663783 (-) 2163 WP_094934909.1 YccS family putative transporter -
  L3070_RS07945 (L3070_07945) - 1663803..1664249 (-) 447 WP_023311032.1 YccF domain-containing protein -
  L3070_RS07950 (L3070_07950) helD 1664373..1666427 (+) 2055 WP_094934910.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23876.44 Da        Isoelectric Point: 9.4588

>NTDB_id=651693 L3070_RS07935 WP_033145121.1 1661038..1661664(+) (sxy/tfoX) [Enterobacter cloacae complex sp. ECL405]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=651693 L3070_RS07935 WP_033145121.1 1661038..1661664(+) (sxy/tfoX) [Enterobacter cloacae complex sp. ECL405]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTCCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAGCGCTATCAGCGCCATCAACGAAACCGACTCAAGGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAAAAC
AAAGCGCTCGGTATTAAGGTTCTCTTCGCACTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A263VSI0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567