Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   L3069_RS07635 Genome accession   NZ_CP091486
Coordinates   1624909..1625535 (+) Length   208 a.a.
NCBI ID   WP_023299743.1    Uniprot ID   A0A9X7L0J6
Organism   Enterobacter cloacae complex sp. ECL411     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1619909..1630535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L3069_RS07615 (L3069_07615) - 1620308..1622068 (-) 1761 WP_023305819.1 Lon protease family protein -
  L3069_RS07620 (L3069_07620) matP 1622255..1622707 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  L3069_RS07625 (L3069_07625) ompA 1622773..1623825 (-) 1053 WP_017694761.1 porin OmpA -
  L3069_RS07630 (L3069_07630) sulA 1624182..1624691 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  L3069_RS07635 (L3069_07635) sxy/tfoX 1624909..1625535 (+) 627 WP_023299743.1 TfoX/Sxy family DNA transformation protein Regulator
  L3069_RS07640 (L3069_07640) yccS 1625492..1627654 (-) 2163 WP_022647659.1 YccS family putative transporter -
  L3069_RS07645 (L3069_07645) - 1627673..1628119 (-) 447 WP_023299745.1 YccF domain-containing protein -
  L3069_RS07650 (L3069_07650) helD 1628242..1630296 (+) 2055 WP_038415790.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.54 Da        Isoelectric Point: 9.4592

>NTDB_id=651673 L3069_RS07635 WP_023299743.1 1624909..1625535(+) (sxy/tfoX) [Enterobacter cloacae complex sp. ECL411]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=651673 L3069_RS07635 WP_023299743.1 1624909..1625535(+) (sxy/tfoX) [Enterobacter cloacae complex sp. ECL411]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCGTCCTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572