Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   L3068_RS07785 Genome accession   NZ_CP091481
Coordinates   1679943..1680569 (+) Length   208 a.a.
NCBI ID   WP_032637053.1    Uniprot ID   A0AAJ6MNH4
Organism   Enterobacter cloacae complex sp. ECL414     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1674943..1685569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L3068_RS07765 (L3068_07765) - 1675342..1677102 (-) 1761 WP_117581321.1 Lon protease family protein -
  L3068_RS07770 (L3068_07770) matP 1677289..1677741 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  L3068_RS07775 (L3068_07775) ompA 1677805..1678860 (-) 1056 WP_014883252.1 porin OmpA -
  L3068_RS07780 (L3068_07780) sulA 1679216..1679725 (-) 510 WP_014883253.1 SOS-induced cell division inhibitor SulA -
  L3068_RS07785 (L3068_07785) sxy/tfoX 1679943..1680569 (+) 627 WP_032637053.1 TfoX/Sxy family DNA transformation protein Regulator
  L3068_RS07790 (L3068_07790) yccS 1680526..1682688 (-) 2163 WP_023332614.1 YccS family putative transporter -
  L3068_RS07795 (L3068_07795) - 1682708..1683154 (-) 447 WP_023332615.1 YccF domain-containing protein -
  L3068_RS07800 (L3068_07800) helD 1683278..1685332 (+) 2055 WP_117581323.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23930.53 Da        Isoelectric Point: 9.0691

>NTDB_id=651649 L3068_RS07785 WP_032637053.1 1679943..1680569(+) (sxy/tfoX) [Enterobacter cloacae complex sp. ECL414]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAIDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERCQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARECWLKMRAKN
RALGIKVLFALEGAIEGLHEAALPAGTRRELTEWFNALPEPQKNHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=651649 L3068_RS07785 WP_032637053.1 1679943..1680569(+) (sxy/tfoX) [Enterobacter cloacae complex sp. ECL414]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCCCAGGAATACCTCTCACCGCTAGGAGAAATTCATCATCGCGCCCT
GTTCGGTGGCTATACCCTGGCGATAGATGACGCGGTTTTTGCCATGGTGTCAGATGGCGAGCTGTACCTTCGCGCCTGTG
AAGAAAGCGCGAAATACTGTGTAAAAAATGCCGCCTCTTTTTTGACGCTGATGAAACGAGGCCGCCCGGTACTTCTCAAC
TATTACCGTGTCGATGATGGACTGTGGCAAGACAGGGAACGGCTGCTTCAGCTCTCCTCTTTCGCGCTCAATGCGGCGAG
GAAAGAGCGCTGTCAGCGCCATCAACGAAACCGGCTTAAAGATCTGCCAAACCTGACCTTTCAGCTTGAGGTATTACTTT
TTGAAGCTGGCATTACTAACGAAGAGACGCTGCGGGCACTGGGTGCCAGGGAGTGCTGGTTAAAGATGCGGGCTAAAAAT
AGGGCACTCGGTATTAAAGTGCTCTTCGCCCTTGAGGGGGCTATTGAGGGTTTGCATGAGGCGGCACTCCCGGCAGGCAC
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGAAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.143

97.596

0.558