Detailed information NTG0651533

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG905_RS26610
• Genome accession: NZ_CP108019
• Coordinates: 5813721..5815013 (+)
• Length: 430 a.a.
• NCBI ID: WP_328677831.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00322
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5808721..5820013

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG905_RS26580 (OG905_26605)	-	5809800..5809994 (+)	195	WP_266476365.1	hypothetical protein	-
OG905_RS26595 (OG905_26620)	tig	5810613..5812010 (+)	1398	WP_328677829.1	trigger factor	-
OG905_RS26600 (OG905_26625)	-	5812242..5812859 (+)	618	WP_328677830.1	ATP-dependent Clp protease proteolytic subunit	-
OG905_RS26605 (OG905_26630)	clpP	5812901..5813575 (+)	675	WP_313904719.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG905_RS26610 (OG905_26635)	clpX	5813721..5815013 (+)	1293	WP_328677831.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG905_RS26615 (OG905_26640)	-	5815080..5816033 (-)	954	WP_328677832.1	hypothetical protein	-
OG905_RS26620 (OG905_26645)	-	5816170..5818815 (+)	2646	WP_328677833.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47025.98 Da
• Isoelectric Point: 4.8809

>NTDB_id=651533 OG905_RS26610 WP_328677831.1 5813721..5815013(+) (clpX) [Streptomyces sp. NBC_00322]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLKILVEPRNALVKQYQRLFELDGVELDFDLPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHNNVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=651533 OG905_RS26610 WP_328677831.1 5813721..5815013(+) (clpX) [Streptomyces sp. NBC_00322]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCGGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGGGGCACGGGCCG
GGACGACGCGATCGAACTGGCCAAGTCGAACATCCTGCTGCTGGGCCCCACCGGGTCCGGCAAGACTCTTCTCGCCCAAA
CCCTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGTGAAAACCCGTCGATCACCCGTGACGTGTCGGGCGAAGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAAGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGACGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGATCATCGAGTCGCGGGCGGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTGAAGATCCTGGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGCCTGTTCGAACTGGACGGCGT
GGAGCTGGACTTCGACCTCCCGGCCCTGGAGGCGATCGCAGACCAGGCGATCCTGCGCGGCACGGGCGCGCGTGGCCTCC
GGGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCCTCCCGCAAGGACGTCGCGCGGGTGGTCATCACG
GCGGACGTGGTGCACAACAACGTGAACCCGACGCTGGTGCCGCGGGAGCCGAGGATCGTGAAGAACGACGGGCGGCACGA
GAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.488	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.641	95.814	0.514