Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG905_RS19535 Genome accession   NZ_CP108019
Coordinates   4310539..4310754 (-) Length   71 a.a.
NCBI ID   WP_328673680.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00322     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4305539..4315754
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG905_RS19510 (OG905_19520) - 4306206..4306574 (-) 369 WP_328673672.1 hypothetical protein -
  OG905_RS19515 (OG905_19525) - 4306714..4308276 (-) 1563 WP_328673674.1 FAD-dependent monooxygenase -
  OG905_RS19520 (OG905_19530) - 4308451..4308597 (+) 147 WP_328673676.1 hypothetical protein -
  OG905_RS19525 (OG905_19535) - 4308745..4309557 (+) 813 WP_328673677.1 maleylpyruvate isomerase family mycothiol-dependent enzyme -
  OG905_RS19530 (OG905_19540) - 4309659..4310435 (+) 777 WP_328673678.1 DUF72 domain-containing protein -
  OG905_RS19535 (OG905_19545) dinR/lexA 4310539..4310754 (-) 216 WP_328673680.1 MarR family transcriptional regulator Regulator
  OG905_RS19540 (OG905_19555) - 4311451..4312371 (+) 921 WP_328673682.1 helix-turn-helix transcriptional regulator -
  OG905_RS19545 (OG905_19560) - 4312693..4313277 (+) 585 WP_328673683.1 TIGR03086 family metal-binding protein -
  OG905_RS19550 (OG905_19565) - 4313395..4314456 (+) 1062 WP_328673685.1 hypothetical protein -

Sequence

Protein


Download         Length: 71 a.a.        Molecular weight: 8017.07 Da        Isoelectric Point: 9.4763

>NTDB_id=651519 OG905_RS19535 WP_328673680.1 4310539..4310754(-) (dinR/lexA) [Streptomyces sp. NBC_00322]
MVDRLSARQESILRCITEWIADHGEAPTIREIGESVGLSSTSSVAYQLRRLEQAGLISRSRRSWRSCRIGN

Nucleotide


Download         Length: 216 bp        

>NTDB_id=651519 OG905_RS19535 WP_328673680.1 4310539..4310754(-) (dinR/lexA) [Streptomyces sp. NBC_00322]
GTGGTCGATCGCCTGAGCGCGCGGCAGGAGAGCATTCTGCGGTGCATCACGGAGTGGATAGCTGACCATGGCGAGGCCCC
GACGATCCGCGAGATCGGTGAGAGCGTCGGCCTGTCCAGCACGTCGTCGGTGGCCTACCAGCTCCGCCGGTTGGAACAAG
CCGGGCTGATCAGCCGCAGCCGCCGGAGCTGGCGCTCCTGCCGCATCGGCAACTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(4-61)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.97

92.958

0.437