Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG485_RS31130 Genome accession   NZ_CP108013
Coordinates   7078750..7079526 (-) Length   258 a.a.
NCBI ID   WP_103549644.1    Uniprot ID   A0A2I0SRN7
Organism   Streptomyces sp. NBC_00328     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 7073750..7084526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG485_RS31120 (OG485_31135) - 7075466..7076305 (+) 840 WP_328671910.1 GNAT family N-acetyltransferase -
  OG485_RS31125 (OG485_31140) - 7076572..7078614 (+) 2043 WP_328671911.1 ATP-dependent DNA helicase -
  OG485_RS31130 (OG485_31145) dinR/lexA 7078750..7079526 (-) 777 WP_103549644.1 transcriptional repressor LexA Regulator
  OG485_RS31135 (OG485_31150) nrdR 7080046..7080597 (+) 552 WP_328671912.1 transcriptional regulator NrdR -
  OG485_RS31140 (OG485_31155) - 7080761..7083667 (+) 2907 WP_328671913.1 vitamin B12-dependent ribonucleotide reductase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 27977.71 Da        Isoelectric Point: 7.4755

>NTDB_id=651458 OG485_RS31130 WP_103549644.1 7078750..7079526(-) (dinR/lexA) [Streptomyces sp. NBC_00328]
MTTTADSATITAQDRSQGRLEPVHVMNEAANHEGPKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQSSVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVEDV
FPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNSAYQPI
PGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 777 bp        

>NTDB_id=651458 OG485_RS31130 WP_103549644.1 7078750..7079526(-) (dinR/lexA) [Streptomyces sp. NBC_00328]
GTGACCACCACCGCAGACAGCGCCACCATCACCGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCATGTGATGAA
CGAAGCCGCGAATCATGAGGGGCCAAAGCGCTCCCTGCCTGGCCGACCTCCAGGCATCCGGGCCGACAGCTCGGGACTCA
CGGACCGGCAGCGCCGGGTGATCGAGGTGATCCGGGACTCCGTGCAGCGGCGCGGCTACCCGCCGTCGATGCGGGAGATC
GGGCAGGCCGTCGGCCTCTCCAGCACCTCCTCCGTCGCACACCAGCTGATGGCATTGGAGCGCAAGGGCTTCCTGCGGCG
AGACCCGCACCGCCCGCGCGCGTACGAGGTACGGGGGTCCGACCAGTCGTCGGTGCAGCCGACGGACACCGCGGGCAAGC
CGGCCGCGTCCTACGTTCCGCTCGTCGGCCGTATCGCCGCCGGTGGCCCGATCCTCGCCGAGGAGTCGGTGGAGGACGTG
TTCCCCCTCCCCCGCCAGCTCGTCGGCGACGGGGAGCTGTTCGTCCTGAAGGTCGTCGGTGACTCGATGATCGAGGCCGC
CATCTGCGACGGGGACTGGGTGACGGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACATCGTCGCCGCGATGCTGGACG
GCGAAGCCACGGTGAAGCGGTTCAAGCGCGAGGACGGACACGTGTGGCTGCTGCCGCACAACTCGGCGTACCAGCCGATC
CCCGGTGACGAGGCGACCATCCTCGGAAAGGTCGTCGCCGTGCTGCGCCGGGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(140-252)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2I0SRN7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.714

81.395

0.372