Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   LZS83_RS21245 Genome accession   NZ_CP091444
Coordinates   4147937..4148683 (-) Length   248 a.a.
NCBI ID   WP_063222930.1    Uniprot ID   A0A2B0XAC6
Organism   Bacillus cereus strain MO2     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 4142937..4153683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZS83_RS21230 dnaG 4143705..4145501 (-) 1797 WP_199677512.1 DNA primase -
  LZS83_RS21235 - 4146355..4147167 (-) 813 WP_060632300.1 pyruvate, water dikinase regulatory protein -
  LZS83_RS21240 - 4147197..4147829 (-) 633 WP_000583758.1 helix-turn-helix transcriptional regulator -
  LZS83_RS21245 recO 4147937..4148683 (-) 747 WP_063222930.1 DNA repair protein RecO Machinery gene
  LZS83_RS21250 - 4148717..4148860 (-) 144 WP_000883924.1 YqzL family protein -
  LZS83_RS21255 era 4149036..4149941 (-) 906 WP_048531222.1 GTPase Era -
  LZS83_RS21260 - 4149934..4150332 (-) 399 WP_001086294.1 cytidine deaminase -
  LZS83_RS21265 - 4150432..4150785 (-) 354 WP_242252267.1 diacylglycerol kinase family protein -
  LZS83_RS21270 ybeY 4150782..4151252 (-) 471 WP_242252268.1 rRNA maturation RNase YbeY -
  LZS83_RS21275 - 4151249..4153393 (-) 2145 WP_063222928.1 HD family phosphohydrolase -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 28655.18 Da        Isoelectric Point: 8.0540

>NTDB_id=651209 LZS83_RS21245 WP_063222930.1 4147937..4148683(-) (recO) [Bacillus cereus strain MO2]
MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLIQMGSGLGTLQQGEIISTMKE
IREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLHYMCEGVDSEVLSLIYQTKMLPVLGMRPYFDTCAICHQETD
FVAFSVREGGFLCSRHAEQDQYRIPVGEAVHKLLRLFYHFDLHRLGNVSVKDSTKKQMRLVLNTYYDEYCGIYLKSRRFL
EQLDKFQI

Nucleotide


Download         Length: 747 bp        

>NTDB_id=651209 LZS83_RS21245 WP_063222930.1 4147937..4148683(-) (recO) [Bacillus cereus strain MO2]
ATGTTTCAAAAAGTTGAGGGCATCGTTATCCGTACGACAGATTACGGAGAAACGAACAAGATTGTTACAATATTCTCAAG
AGAACTTGGTAAGGTAAGTGCAATGGCAAGAGGAGCGAAAAAACCGAAAAGCCGGTTAGCATCTGTTTCGCAACTTATGA
CACATGGTCATTTCCTTATACAAATGGGATCTGGACTTGGAACTTTGCAACAAGGCGAGATTATTTCAACTATGAAAGAA
ATTCGCGAGGATATATTTTTAACTGCTTATGCATCATTTATTGTTGAGTTAACTGATAAAGCAACAGAAGATAAAAAACA
TAATCCATATTTATTTGAAATGTTATATCAAACGTTGCATTACATGTGTGAGGGTGTTGATTCAGAAGTATTATCATTAA
TTTATCAAACGAAAATGCTTCCGGTATTAGGGATGCGCCCGTACTTTGATACATGTGCGATTTGTCATCAAGAAACAGAT
TTTGTCGCCTTCTCTGTCCGGGAAGGCGGTTTTCTGTGCTCGCGTCATGCTGAGCAAGATCAGTATCGTATACCAGTGGG
GGAAGCCGTTCATAAATTATTACGTCTTTTCTACCACTTCGATTTACATAGACTTGGCAATGTATCAGTGAAGGATAGCA
CAAAAAAACAAATGCGTTTAGTGTTGAATACATATTATGATGAATATTGCGGGATTTATTTGAAATCAAGACGTTTCTTA
GAACAACTTGATAAGTTTCAAATATAA

Domains

Predicted by InterproScan.

Recombination protein O C terminal (RecO_C)

(82-238)

Recombination protein O N terminal (RecO_N)

(1-77)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2B0XAC6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

55.061

99.597

0.548