Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   LZS83_RS19785 Genome accession   NZ_CP091444
Coordinates   3894876..3895310 (-) Length   144 a.a.
NCBI ID   WP_309259269.1    Uniprot ID   -
Organism   Bacillus cereus strain MO2     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3889876..3900310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZS83_RS19770 - 3890886..3891467 (+) 582 WP_063223131.1 PadR family transcriptional regulator -
  LZS83_RS19775 metE 3892124..3894412 (+) 2289 WP_063223130.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  LZS83_RS19780 comJ 3894450..3894839 (-) 390 WP_060632097.1 competence protein ComJ -
  LZS83_RS19785 nucA/comI 3894876..3895310 (-) 435 WP_309259269.1 DNA-entry nuclease Machinery gene
  LZS83_RS19790 - 3895547..3896296 (+) 750 WP_098555055.1 DUF3967 domain-containing protein -
  LZS83_RS19795 kinB 3896335..3897609 (-) 1275 WP_063223127.1 sporulation sensor histidine kinase KinB -
  LZS83_RS19800 - 3897919..3898119 (+) 201 WP_000929285.1 hypothetical protein -
  LZS83_RS19805 - 3898243..3899406 (+) 1164 WP_063223126.1 aminotransferase A -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16084.41 Da        Isoelectric Point: 7.8607

>NTDB_id=651205 LZS83_RS19785 WP_309259269.1 3894876..3895310(-) (nucA/comI) [Bacillus cereus strain MO2]
MKQLKGIIISIIAILSIVVAVYEVLIPEETSTKKTNAYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKEAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFDVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=651205 LZS83_RS19785 WP_309259269.1 3894876..3895310(-) (nucA/comI) [Bacillus cereus strain MO2]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATTGCAATTCTTTCTATTGTAGTAGCGGTTTATGAAGTACTTATTCC
AGAGGAAACAAGTACAAAAAAAACAAATGCGTATGATCAAGTTCTAGAATTTCCGAAAGAGAGATATCCAGAAACCGGGA
AACATATTACGGATGCGATAAAAGAAGGACATTCAGAAGTTTGTACAATCGACCGTGGTGGTGCTGCGGATAGAAGAAAA
TTATCGTTAGCTCCATACCCATCAAAAAAAGGGTACGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGCGGAAA
AGAAGCACATATCGAATATATAAGTCCAGCAGATAACCGCGGAGCAGGGTCTTGGGTAGGGAATAAGCTAGATAAATACC
CAGATGGTACGCGTGTGAAATTTGACGTAAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

65.833

83.333

0.549