Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   LZS83_RS19740 Genome accession   NZ_CP091444
Coordinates   3885290..3885748 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus cereus strain MO2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3880290..3890748
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZS83_RS19725 - 3880947..3881183 (+) 237 WP_000283743.1 hypothetical protein -
  LZS83_RS19730 - 3881357..3883465 (-) 2109 WP_309259266.1 polyphosphate kinase -
  LZS83_RS19735 ppx 3883574..3885112 (-) 1539 WP_309259267.1 exopolyphosphatase -
  LZS83_RS19740 kre 3885290..3885748 (+) 459 WP_000804864.1 YkyB family protein Regulator
  LZS83_RS19745 - 3885780..3886442 (-) 663 WP_063223136.1 YkyA family protein -
  LZS83_RS19750 - 3887093..3887734 (-) 642 WP_242252076.1 diguanylate cyclase domain-containing protein -
  LZS83_RS19755 - 3887899..3888132 (+) 234 WP_063223134.1 SPP1 phage holin family protein -
  LZS83_RS19760 - 3888164..3888664 (-) 501 WP_242252077.1 hypothetical protein -
  LZS83_RS19765 - 3889193..3890734 (+) 1542 WP_309259268.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=651204 LZS83_RS19740 WP_000804864.1 3885290..3885748(+) (kre) [Bacillus cereus strain MO2]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=651204 LZS83_RS19740 WP_000804864.1 3885290..3885748(+) (kre) [Bacillus cereus strain MO2]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAACCCGAAGTATTTATACTGGTTAAAAAAGACTGCTTTAGAACGCTTAATTGCTGAAA
AAAAAGCTATTAAAGAAGGATTGCATTTTTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTTGGCCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAGACACTTCAAGATTACATTGGTCCTGAAGCACTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493