Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   LZS83_RS09745 Genome accession   NZ_CP091444
Coordinates   1906253..1906540 (+) Length   95 a.a.
NCBI ID   WP_063222805.1    Uniprot ID   A0A2B0WV84
Organism   Bacillus cereus strain MO2     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 1901253..1911540
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZS83_RS09725 - 1902431..1902628 (+) 198 WP_309260033.1 DUF4083 domain-containing protein -
  LZS83_RS09730 - 1902659..1903120 (+) 462 WP_242251592.1 NUDIX hydrolase -
  LZS83_RS09735 nadE 1903168..1903986 (-) 819 WP_063222807.1 ammonia-dependent NAD(+) synthetase -
  LZS83_RS09740 - 1904258..1906138 (+) 1881 WP_242251594.1 FtsX-like permease family protein -
  LZS83_RS09745 abrB 1906253..1906540 (+) 288 WP_063222805.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator
  LZS83_RS09750 - 1906820..1907770 (+) 951 WP_309260034.1 serine protease -
  LZS83_RS09755 - 1907812..1908120 (-) 309 WP_242251596.1 helix-turn-helix transcriptional regulator -
  LZS83_RS09760 - 1908186..1909121 (+) 936 WP_242251597.1 aldo/keto reductase -
  LZS83_RS09765 - 1909171..1910346 (+) 1176 Protein_1837 MFS transporter -
  LZS83_RS09770 - 1910843..1911205 (+) 363 WP_063222800.1 DUF805 domain-containing protein -

Sequence

Protein


Download         Length: 95 a.a.        Molecular weight: 10620.39 Da        Isoelectric Point: 6.9807

>NTDB_id=651197 LZS83_RS09745 WP_063222805.1 1906253..1906540(+) (abrB) [Bacillus cereus strain MO2]
MKATGIIRKVDELGRIVIPKELREVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDKNISLANGNITVSIDGAK
HLIKEIEKFLNKSEA

Nucleotide


Download         Length: 288 bp        

>NTDB_id=651197 LZS83_RS09745 WP_063222805.1 1906253..1906540(+) (abrB) [Bacillus cereus strain MO2]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAGTTACGAGAAGTATTAGG
AATCCAAATCAAATCACCACTTGAAATTTTCGTAGAAGAAGATAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATAAAAACATATCATTAGCAAATGGGAATATTACTGTTAGTATAGATGGAGCGAAA
CACTTAATAAAAGAAATAGAGAAGTTTTTAAACAAGAGTGAGGCTTAG

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(53-88)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(8-49)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2B0WV84

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

56.667

94.737

0.537