Detailed information    

insolico Bioinformatically predicted

Overview

Name   addB   Type   Machinery gene
Locus tag   LZS83_RS05755 Genome accession   NZ_CP091444
Coordinates   1126035..1129550 (+) Length   1171 a.a.
NCBI ID   WP_309259837.1    Uniprot ID   -
Organism   Bacillus cereus strain MO2     
Function   homologous recombination; plasmid transformation (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1121035..1134550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZS83_RS05715 - 1121184..1121975 (-) 792 WP_309259836.1 aminoglycoside phosphotransferase family protein -
  LZS83_RS05720 - 1121995..1122489 (-) 495 WP_242250949.1 DUF6584 family protein -
  LZS83_RS05725 cspA 1122774..1122977 (+) 204 WP_000301522.1 RNA chaperone/antiterminator CspA -
  LZS83_RS05730 - 1123079..1123354 (+) 276 WP_063224649.1 hypothetical protein -
  LZS83_RS05735 - 1123381..1123566 (-) 186 WP_063224648.1 hypothetical protein -
  LZS83_RS05740 - 1123849..1124430 (+) 582 WP_242250950.1 competence protein ComK -
  LZS83_RS05745 - 1124705..1125298 (+) 594 WP_000347517.1 TVP38/TMEM64 family protein -
  LZS83_RS05750 lepB 1125355..1125918 (+) 564 WP_063224645.1 signal peptidase I -
  LZS83_RS05755 addB 1126035..1129550 (+) 3516 WP_309259837.1 helicase-exonuclease AddAB subunit AddB Machinery gene
  LZS83_RS05760 addA 1129547..1133272 (+) 3726 WP_242250954.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  LZS83_RS05765 - 1133285..1133572 (+) 288 WP_242250956.1 RNA polymerase alpha subunit C-terminal domain-containing protein -
  LZS83_RS05770 gerPF 1133627..1133842 (-) 216 WP_001141570.1 spore germination protein GerPF -
  LZS83_RS05775 - 1133885..1134271 (-) 387 WP_063224641.1 spore germination protein GerPE -
  LZS83_RS05780 gerPD 1134287..1134481 (-) 195 WP_001052807.1 spore germination protein GerPD -

Sequence

Protein


Download         Length: 1171 a.a.        Molecular weight: 134238.33 Da        Isoelectric Point: 5.1758

>NTDB_id=651186 LZS83_RS05755 WP_309259837.1 1126035..1129550(+) (addB) [Bacillus cereus strain MO2]
MSLRFVIGRAGSGKSTLCLHEVQEELKQRPRGKTILYLVPEQMTFQTQQALIGSEDVRGSIRAQVFSFSRLAWKVLQEVG
GASRLHIDEAGVHMLLRKIVESRKDGLSVFQKAAEQNGFFEHLGSMIAEFKRYNVTPSNVYEMWQQLDAHSNSAEQKLLA
NKVYDLQLLYDDFERALIGKYLDSEDYLQLLVEKLPQSEYVNQAEIYIDGFHSFSPQELEIVRQLMICGARVTITLTIDE
KTLAQPVNELDLFYETTLTYEKIKQVAREEKIEIEKTIPLMEQPRFHSQALAHLETHYEARPNEKFHGEASVTISTAANL
RAEVEGVAREIRRLVADEDYRYRDIAVLLRNGESYYDVMRTLFTDYNIPHFIDEKRPMSHHPLVECIRSALEIISGNWRY
DAVFRCVKTELLYPLDVRKEAMREEMDEFENYCLAYGVQGKRWISEDTWMYRRYRSLDDTNGMITDSEREMEEKINRLRD
VVRTPVIRMQKRLKRAGTVMQMCEAVYLFLEELDVPKKLEALRIRAEESGDFLFATDHEQVWEEVMSLLDTFVEMLGEEK
MSLSMFTDIMSTGLEALQFANIPPSLDQVLIANIDRSRLSNVKATFVIGVNEGVIPAAPMDEGMLSDEERDVLGAAGIEL
APTTRQTLLEEQFVMYQMVTRATEKLYISCPLADEEGKTLLASSFIKKIKRMFPDVKESFITNDVNDLSRSEQISYVATP
EVTLSYVMQQLQTWKRYGFEGNLDFWWDVYNFYVTSDEWKQKSSRVLSSLFYRNRAQKLSTVVSRDLYGDTIKGSVSRME
LFNRCAYAHFAQHGLSLRERDIFKLDAPDIGELFHAALKRIADRLLRENRTWADLSIKECEHLSAVVIEEIAPLLQRQIL
LSSNRHFYLKQKLQQIIFRTSIILREHAKSSGFVPVDLEVPFGMGGTGSLPPMEFSLPNGVKMEVVGRIDRVDKAEDENG
TFLRIIDYKSSSKALDLTEVYYGLALQMLTYLDVVTSNAQTWMKKGGTASPAGVLYFHIHNPIVEVKGDASEAEIEKEIL
KKFKMKGLVLGDADVVRLMDNKLSTGSSDIISAGLKKDGSFSARSSIASEQEFNVLQKYVHHTFENIGKDITEGVIDIAP
YKKGNKAACTFCNFKSVCQFDESLEDNQFRTLKDMKDSEAMEKIREEVGGE

Nucleotide


Download         Length: 3516 bp        

>NTDB_id=651186 LZS83_RS05755 WP_309259837.1 1126035..1129550(+) (addB) [Bacillus cereus strain MO2]
ATGTCACTTCGATTTGTGATTGGTAGAGCGGGAAGTGGAAAAAGTACACTTTGTTTACACGAAGTGCAAGAAGAGTTAAA
GCAGCGTCCAAGAGGGAAAACAATACTATATCTTGTGCCAGAACAGATGACATTCCAAACGCAGCAGGCGTTAATTGGTA
GTGAGGATGTTAGAGGTTCTATTCGGGCACAAGTTTTTAGTTTTTCACGGTTAGCGTGGAAGGTATTGCAAGAAGTTGGT
GGAGCGAGTCGTCTTCACATTGATGAAGCGGGCGTACATATGTTACTTCGTAAAATTGTAGAGTCTCGTAAAGATGGATT
ATCGGTGTTCCAAAAGGCAGCGGAGCAAAACGGTTTTTTTGAACATCTTGGCAGCATGATTGCGGAGTTTAAACGATATA
ACGTGACGCCATCTAACGTATATGAAATGTGGCAACAATTAGATGCGCATAGTAACAGTGCCGAACAAAAGCTATTAGCG
AATAAAGTGTATGATTTACAATTACTATATGATGATTTTGAGCGTGCTTTAATCGGAAAATATTTAGATTCAGAAGACTA
CCTGCAATTGCTAGTCGAAAAGCTTCCGCAGTCTGAATATGTAAATCAGGCTGAAATTTATATAGATGGATTTCATTCGT
TTTCACCGCAAGAGCTAGAAATTGTAAGACAGCTTATGATTTGCGGAGCGAGAGTTACGATTACGTTAACGATAGATGAA
AAGACGTTAGCACAGCCAGTAAATGAACTAGATCTATTTTATGAAACGACGTTAACGTATGAAAAAATAAAACAAGTAGC
ACGTGAAGAGAAGATAGAAATTGAAAAAACGATTCCGCTTATGGAACAGCCACGTTTTCATTCGCAAGCATTAGCGCATT
TAGAAACGCATTACGAAGCACGTCCAAATGAAAAGTTTCACGGTGAAGCGAGTGTAACGATTAGTACAGCAGCTAATTTA
CGAGCTGAAGTAGAAGGTGTTGCTCGTGAAATTCGTAGACTTGTGGCGGACGAAGATTATCGTTACCGCGATATTGCAGT
TCTTCTTCGTAACGGGGAAAGTTATTACGATGTGATGCGAACGTTATTTACAGATTATAATATCCCGCACTTCATCGATG
AAAAACGACCGATGTCACATCATCCGCTAGTAGAATGCATTCGTTCAGCACTCGAGATTATTAGCGGGAATTGGCGTTAT
GATGCAGTGTTTCGCTGCGTGAAAACAGAGCTTTTATATCCATTAGACGTAAGAAAAGAAGCAATGCGCGAAGAGATGGA
TGAGTTTGAAAACTACTGTTTAGCGTACGGTGTACAAGGGAAGAGATGGATTTCTGAGGATACGTGGATGTATCGACGCT
ATCGTTCTCTTGACGATACGAACGGGATGATTACAGACAGTGAACGTGAAATGGAAGAGAAAATAAATCGATTGCGCGAC
GTTGTAAGAACGCCTGTTATTCGTATGCAAAAAAGACTGAAGCGTGCGGGAACAGTTATGCAAATGTGTGAAGCTGTTTA
CTTATTTTTAGAAGAGCTGGATGTTCCGAAAAAACTAGAAGCATTACGTATTCGTGCAGAAGAGAGCGGCGATTTCTTAT
TTGCGACAGATCATGAGCAAGTATGGGAAGAAGTAATGAGTCTTCTTGATACGTTCGTTGAGATGCTTGGCGAAGAGAAA
ATGTCACTTTCTATGTTCACAGACATTATGTCGACAGGTCTTGAGGCGCTTCAATTCGCAAACATTCCGCCGTCATTAGA
CCAAGTGTTAATTGCTAACATTGATCGTTCTAGGTTATCAAATGTGAAAGCAACATTCGTCATTGGGGTAAATGAAGGTG
TCATTCCAGCAGCACCTATGGATGAAGGTATGCTTTCTGATGAGGAAAGAGATGTTCTTGGTGCGGCAGGAATTGAATTA
GCACCAACGACGAGGCAAACTTTATTAGAAGAACAGTTCGTTATGTACCAAATGGTAACGAGAGCAACTGAGAAATTATA
TATTTCCTGTCCGCTCGCAGACGAAGAAGGAAAGACGTTACTTGCGTCTAGCTTTATTAAGAAAATAAAAAGAATGTTCC
CTGATGTGAAAGAATCGTTTATTACGAATGACGTAAATGATTTATCACGTTCGGAACAAATTTCATACGTAGCAACGCCA
GAAGTAACGTTGTCATATGTTATGCAGCAACTTCAAACGTGGAAACGATATGGATTTGAAGGGAATTTAGACTTTTGGTG
GGATGTATATAATTTCTACGTCACTTCAGATGAATGGAAGCAAAAAAGTAGCCGCGTGCTATCAAGTTTATTCTACCGAA
ATCGTGCGCAGAAATTAAGCACAGTTGTAAGTAGAGATTTATACGGAGATACAATTAAGGGAAGCGTCTCTCGTATGGAA
CTATTTAACCGTTGTGCATACGCTCATTTCGCGCAGCACGGTTTATCATTAAGAGAGCGTGATATTTTCAAATTGGATGC
GCCGGATATCGGGGAATTATTCCATGCAGCGCTGAAGAGAATTGCAGACAGGCTATTACGTGAGAACCGTACTTGGGCGG
ATTTATCAATAAAAGAGTGTGAACATCTTTCTGCTGTAGTAATAGAAGAAATTGCACCGTTATTACAAAGACAAATTTTA
TTAAGCTCAAATCGTCATTTCTATTTAAAACAAAAACTACAACAAATTATTTTCCGTACGTCAATTATTCTGCGTGAACA
TGCGAAGTCGAGCGGTTTCGTACCAGTTGATTTAGAAGTGCCATTCGGTATGGGCGGTACAGGATCACTTCCGCCGATGG
AATTCTCATTACCAAATGGTGTGAAGATGGAAGTAGTTGGTCGTATTGACCGTGTTGATAAGGCAGAAGACGAAAACGGG
ACATTCCTACGTATTATTGACTATAAATCAAGTTCAAAAGCGTTAGACTTAACGGAAGTGTATTACGGATTAGCTCTTCA
AATGTTAACGTATTTAGATGTTGTTACTTCAAATGCACAGACGTGGATGAAAAAAGGCGGCACAGCATCACCAGCTGGTG
TATTGTATTTCCACATTCATAACCCAATCGTTGAGGTGAAAGGTGACGCATCTGAAGCAGAAATTGAAAAGGAAATTTTA
AAGAAATTCAAAATGAAAGGGCTCGTACTAGGAGATGCTGACGTTGTTCGTTTAATGGATAACAAACTTTCAACAGGAAG
CTCAGATATTATTTCTGCTGGTTTGAAAAAAGACGGTAGCTTTAGTGCGCGTTCTAGCATTGCAAGTGAACAAGAGTTTA
ACGTACTCCAAAAATACGTACACCATACGTTTGAAAATATCGGAAAAGATATTACAGAAGGTGTAATCGATATTGCTCCT
TACAAAAAGGGGAATAAAGCGGCGTGTACGTTCTGTAACTTCAAATCGGTTTGTCAGTTCGATGAATCACTTGAAGATAA
TCAATTCCGTACGTTAAAAGATATGAAAGATAGTGAAGCGATGGAGAAAATTAGAGAGGAGGTTGGCGGAGAATGA

Domains

Predicted by InterproScan.

PD-(D/E)XK nuclease superfamily (PDDEXK_1)

(795-1139)

UvrD-like helicase C-terminal domain (UvrD_C)

(303-669)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  addB Bacillus subtilis subsp. subtilis str. 168

49.063

100

0.492