Detailed information NTG0650973

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: L3V45_RS17800
• Genome accession: NZ_CP091421
• Coordinates: 3587850..3588995 (+)
• Length: 381 a.a.
• NCBI ID: WP_234949492.1
• Uniprot ID: -
• Organism: Bacillus sp. R45
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3582850..3593995

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L3V45_RS17780 (L3V45_17780)	-	3583324..3584040 (-)	717	WP_003151075.1	Crp/Fnr family transcriptional regulator	-
L3V45_RS17785 (L3V45_17785)	narK	3584138..3585328 (-)	1191	WP_003151073.1	nitrate transporter NarK	-
L3V45_RS17790 (L3V45_17790)	argS	3585463..3587133 (-)	1671	WP_003151071.1	arginine--tRNA ligase	-
L3V45_RS17795 (L3V45_17795)	-	3587130..3587558 (-)	429	WP_003151069.1	DUF1934 family protein	-
L3V45_RS17800 (L3V45_17800)	rapF	3587850..3588995 (+)	1146	WP_234949492.1	aspartate phosphatase	Regulator
L3V45_RS17805 (L3V45_17805)	-	3588979..3589098 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
L3V45_RS17810 (L3V45_17810)	speB	3589221..3590093 (-)	873	WP_003151054.1	agmatinase	-
L3V45_RS17815 (L3V45_17815)	speE	3590153..3590983 (-)	831	WP_003151052.1	spermidine synthase	-
L3V45_RS17820 (L3V45_17820)	-	3591183..3593255 (+)	2073	WP_048367772.1	transglycosylase domain-containing protein	-
L3V45_RS17825 (L3V45_17825)	-	3593279..3593710 (-)	432	WP_103695198.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45710.23 Da
• Isoelectric Point: 5.1522

>NTDB_id=650973 L3V45_RS17800 WP_234949492.1 3587850..3588995(+) (rapF) [Bacillus sp. R45]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAGLEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=650973 L3V45_RS17800 WP_234949492.1 3587850..3588995(+) (rapF) [Bacillus sp. R45]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGGAT
TGGAACAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGCATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533