Detailed information NTG0650911

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: L3V45_RS01950
• Genome accession: NZ_CP091421
• Coordinates: 383412..384560 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus sp. R45
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 378412..389560

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L3V45_RS01930 (L3V45_01930)	-	378809..379492 (-)	684	WP_236837232.1	ABC transporter ATP-binding protein	-
L3V45_RS01935 (L3V45_01935)	-	379507..380943 (-)	1437	WP_095318526.1	ABC transporter permease	-
L3V45_RS01940 (L3V45_01940)	-	381156..381839 (+)	684	WP_143255796.1	response regulator transcription factor	-
L3V45_RS01945 (L3V45_01945)	-	381826..383259 (+)	1434	WP_161625271.1	HAMP domain-containing sensor histidine kinase	-
L3V45_RS01950 (L3V45_01950)	rapC	383412..384560 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
L3V45_RS01955 (L3V45_01955)	phrC	384544..384663 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
L3V45_RS01960 (L3V45_01960)	-	384814..384909 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
L3V45_RS01965 (L3V45_01965)	-	385004..386368 (-)	1365	WP_046559345.1	aspartate kinase	-
L3V45_RS01970 (L3V45_01970)	ceuB	386783..387736 (+)	954	WP_003156332.1	ABC transporter permease	Machinery gene
L3V45_RS01975 (L3V45_01975)	-	387726..388673 (+)	948	WP_003156331.1	iron chelate uptake ABC transporter family permease subunit	-
L3V45_RS01980 (L3V45_01980)	-	388667..389425 (+)	759	WP_015388706.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=650911 L3V45_RS01950 WP_003156336.1 383412..384560(+) (rapC) [Bacillus sp. R45]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=650911 L3V45_RS01950 WP_003156336.1 383412..384560(+) (rapC) [Bacillus sp. R45]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCAGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
CCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568