Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   L3I92_RS12695 Genome accession   NZ_CP091412
Coordinates   2574929..2575816 (+) Length   295 a.a.
NCBI ID   WP_000143415.1    Uniprot ID   -
Organism   Staphylococcus aureus strain ATR-20003     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2569929..2580816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L3I92_RS12665 (L3I92_002526) - 2570666..2571427 (+) 762 WP_000323450.1 alpha/beta hydrolase family protein -
  L3I92_RS12670 (L3I92_002527) - 2571667..2572122 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  L3I92_RS13975 - 2572244..2572345 (+) 102 WP_000731972.1 SE2200 family small protein -
  L3I92_RS12680 (L3I92_002529) - 2572405..2573829 (-) 1425 WP_000953745.1 alkaline phosphatase -
  L3I92_RS12685 (L3I92_002530) - 2574027..2574227 (+) 201 WP_000604722.1 hypothetical protein -
  L3I92_RS12690 (L3I92_002531) braR 2574253..2574918 (+) 666 WP_000697883.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  L3I92_RS12695 (L3I92_002532) braS 2574929..2575816 (+) 888 WP_000143415.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  L3I92_RS12700 (L3I92_002533) - 2575924..2576679 (+) 756 WP_000923765.1 ABC transporter ATP-binding protein -
  L3I92_RS12705 (L3I92_002534) - 2576676..2578676 (+) 2001 WP_000776737.1 ABC transporter permease -
  L3I92_RS12710 (L3I92_002535) - 2579351..2579464 (+) 114 WP_072468803.1 hypothetical protein -
  L3I92_RS12715 (L3I92_002536) - 2579846..2580106 (+) 261 WP_072468805.1 hypothetical protein -
  L3I92_RS12720 (L3I92_002537) - 2580116..2580613 (+) 498 WP_001065267.1 glutathione peroxidase -
  L3I92_RS12725 (L3I92_002538) - 2580721..2580809 (-) 89 Protein_2468 hypothetical protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34059.30 Da        Isoelectric Point: 5.6141

>NTDB_id=650901 L3I92_RS12695 WP_000143415.1 2574929..2575816(+) (braS) [Staphylococcus aureus strain ATR-20003]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKDDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEGDLPK
IFDKGYSGYNGQRQSNSTGIGLFIVKQISNHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=650901 L3I92_RS12695 WP_000143415.1 2574929..2575816(+) (braS) [Staphylococcus aureus strain ATR-20003]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAGATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCGAATGTTGTGAATCGTGTTCGTCAAGAGGTAATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATAAACAATATTATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGAATCGGTATTAGTGAGGGAGACTTACCTAAA
ATATTCGACAAAGGTTATTCGGGGTATAATGGACAACGTCAAAGTAATTCAACTGGGATTGGCTTATTTATTGTAAAGCA
AATTTCAAATCACACTAATCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

97.966

100

0.98