Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OHB28_RS26800 Genome accession   NZ_CP107981
Coordinates   5825729..5826853 (-) Length   374 a.a.
NCBI ID   WP_266711290.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00356     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5820729..5831853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHB28_RS26780 (OHB28_26785) - 5821631..5823217 (+) 1587 WP_328633126.1 histidine kinase -
  OHB28_RS26785 (OHB28_26790) - 5823205..5823888 (+) 684 WP_328633127.1 response regulator transcription factor -
  OHB28_RS26790 (OHB28_26795) - 5823967..5824632 (-) 666 WP_327662850.1 phosphatase PAP2 family protein -
  OHB28_RS26795 (OHB28_26800) - 5824819..5825652 (+) 834 WP_327670763.1 hypothetical protein -
  OHB28_RS26800 (OHB28_26805) disA 5825729..5826853 (-) 1125 WP_266711290.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHB28_RS26805 (OHB28_26810) radA/sms 5826946..5828352 (-) 1407 WP_266711289.1 DNA repair protein RadA Machinery gene
  OHB28_RS26810 (OHB28_26815) - 5828603..5830315 (+) 1713 WP_328633128.1 hypothetical protein -
  OHB28_RS26815 (OHB28_26820) - 5830346..5831227 (-) 882 WP_266711287.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40051.83 Da        Isoelectric Point: 4.9989

>NTDB_id=650687 OHB28_RS26800 WP_266711290.1 5825729..5826853(-) (disA) [Streptomyces sp. NBC_00356]
MAANDRAATPGKSGGSSGADSLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVESMCTGGFILDVEFTATRLR
ELCKLDGGIVVSSNLDKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGYTVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVARDYVPEPTAKRSRTVPEALVELDALSHAELLELPIVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=650687 OHB28_RS26800 WP_266711290.1 5825729..5826853(-) (disA) [Streptomyces sp. NBC_00356]
GTGGCAGCCAATGACCGGGCGGCAACTCCCGGCAAGTCCGGCGGAAGCTCCGGTGCGGACAGTCTGATGCGCGCCGCGCT
GAGTGCCGTCGCGCCCGGAACCGCCCTGCGCGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGAGGACTCATCGTCC
TCGGCTCCGACAAGACGGTCGAGTCGATGTGCACGGGCGGCTTCATCCTCGACGTGGAGTTCACGGCCACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCGAACCTCGACAAGATCCTGCGGGCCGGCGTCCAGTTGGTGCC
GGACCCCACGATCCCCACGGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGGTCGGCTACACCG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTGTACGTGGACGGGCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGGGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTGCGCCTCGACGAGGTGGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTCACGGTCCGGGACGTCTCGGCGGTCGCGCAGCGCCTGGAGATGGTGCGGCGCATCG
CCACGGAGATCGCCGAGTACGTCGTCGAGTTGGGCACGGACGGCCGGCTTCTGGCGCTGCAGCTCGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGCGAACTGGTCGCGCGGGACTACGTGCCCGAGCCCACCGCCAAGCGTTCCCGCACGGTCCCGGA
GGCGCTGGTCGAGCTGGACGCGCTCAGCCACGCGGAACTGCTCGAACTGCCGATAGTGGCACGGGCACTGGGCTACACCG
GCTCCCCCGAGGCACTCGACTCGGCGGTGTCCCCGCGCGGCTTCCGTCTCCTGGCCAAGGTGCCGCGCCTCCCTGGCGCC
ATCATCGACCGCCTCGTGGAGCACTTCGGCGGCCTGCAGAAGTTGCTGGCCGCGAGTGTGGACGACCTTCAGACGGTCGA
CGGGGTCGGCGAGGCGCGGGCGCGGAGTGTGCGGGAGGGCCTGTCGCGGTTGGCGGAGTCGTCGATCCTCGAGCGGTACG
TGTAG

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.856

96.791

0.444