Detailed information NTG0650661

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z06_RS16385
• Genome accession: NZ_CP091368
• Coordinates: 3409247..3409948 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AB167-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3404247..3414948

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z06_RS16350 (L2Z06_16350)	kdsB	3404770..3405531 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2Z06_RS16355 (L2Z06_16355)	-	3405543..3406523 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
L2Z06_RS16360 (L2Z06_16360)	-	3406535..3406876 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
L2Z06_RS16365 (L2Z06_16365)	-	3406894..3407667 (+)	774	WP_000497298.1	TatD family hydrolase	-
L2Z06_RS16370 (L2Z06_16370)	-	3407705..3408313 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z06_RS16375 (L2Z06_16375)	-	3408323..3408877 (+)	555	WP_000841373.1	type II secretion system protein	-
L2Z06_RS16380 (L2Z06_16380)	xcpV	3408867..3409247 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z06_RS16385 (L2Z06_16385)	xcpW	3409247..3409948 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z06_RS16390 (L2Z06_16390)	gspK	3409948..3410907 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
L2Z06_RS16395 (L2Z06_16395)	-	3411138..3411734 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
L2Z06_RS16400 (L2Z06_16400)	ung	3411785..3412498 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
L2Z06_RS16405 (L2Z06_16405)	-	3412495..3413619 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z06_RS16410 (L2Z06_16410)	tadA	3413626..3414129 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
L2Z06_RS16415 (L2Z06_16415)	-	3414199..3414642 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=650661 L2Z06_RS16385 WP_000594589.1 3409247..3409948(+) (xcpW) [Acinetobacter baumannii strain AB167-VUB]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=650661 L2Z06_RS16385 WP_000594589.1 3409247..3409948(+) (xcpW) [Acinetobacter baumannii strain AB167-VUB]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996