Detailed information NTG0650496

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z09_RS07525
• Genome accession: NZ_CP091365
• Coordinates: 1563558..1564259 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AB172-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1558558..1569259

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z09_RS07490 (L2Z09_07485)	kdsB	1559081..1559842 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2Z09_RS07495 (L2Z09_07490)	-	1559854..1560834 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
L2Z09_RS07500 (L2Z09_07495)	-	1560846..1561187 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
L2Z09_RS07505 (L2Z09_07500)	-	1561205..1561978 (+)	774	WP_000497298.1	TatD family hydrolase	-
L2Z09_RS07510 (L2Z09_07505)	-	1562016..1562624 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z09_RS07515 (L2Z09_07510)	-	1562634..1563188 (+)	555	WP_000841373.1	type II secretion system protein	-
L2Z09_RS07520 (L2Z09_07515)	xcpV	1563178..1563558 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z09_RS07525 (L2Z09_07520)	xcpW	1563558..1564259 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z09_RS07530 (L2Z09_07525)	gspK	1564259..1565218 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
L2Z09_RS07535 (L2Z09_07530)	-	1565449..1566045 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
L2Z09_RS07540 (L2Z09_07535)	ung	1566096..1566809 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
L2Z09_RS07545 (L2Z09_07540)	-	1566806..1567930 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z09_RS07550 (L2Z09_07545)	tadA	1567937..1568440 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
L2Z09_RS07555 (L2Z09_07550)	-	1568510..1568953 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=650496 L2Z09_RS07525 WP_000594589.1 1563558..1564259(+) (xcpW) [Acinetobacter baumannii strain AB172-VUB]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=650496 L2Z09_RS07525 WP_000594589.1 1563558..1564259(+) (xcpW) [Acinetobacter baumannii strain AB172-VUB]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996