Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | OG996_RS09225 | Genome accession | NZ_CP107971 |
| Coordinates | 1949301..1951835 (+) | Length | 844 a.a. |
| NCBI ID | WP_266524993.1 | Uniprot ID | - |
| Organism | Streptomyces sp. NBC_00366 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1944301..1956835
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OG996_RS09205 (OG996_09205) | - | 1945219..1946061 (-) | 843 | WP_266525001.1 | nitrilase-related carbon-nitrogen hydrolase | - |
| OG996_RS09210 (OG996_09210) | - | 1946254..1947879 (-) | 1626 | WP_327667496.1 | hypothetical protein | - |
| OG996_RS09215 (OG996_09215) | - | 1948006..1948257 (-) | 252 | WP_266524997.1 | helix-turn-helix transcriptional regulator | - |
| OG996_RS09220 (OG996_09220) | map | 1948290..1949057 (+) | 768 | WP_266524995.1 | type I methionyl aminopeptidase | - |
| OG996_RS09225 (OG996_09225) | clpC | 1949301..1951835 (+) | 2535 | WP_266524993.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| OG996_RS09230 (OG996_09230) | ggt | 1951836..1953647 (-) | 1812 | WP_328549769.1 | gamma-glutamyltransferase | - |
| OG996_RS09235 (OG996_09235) | - | 1953754..1954515 (+) | 762 | WP_266524991.1 | hypothetical protein | - |
| OG996_RS09240 (OG996_09240) | - | 1954632..1956197 (+) | 1566 | WP_328549770.1 | CocE/NonD family hydrolase | - |
Sequence
Protein
Download Length: 844 a.a. Molecular weight: 92076.27 Da Isoelectric Point: 4.9238
>NTDB_id=650477 OG996_RS09225 WP_266524993.1 1949301..1951835(+) (clpC) [Streptomyces sp. NBC_00366]
MTSGFSGPEGYDAFGEFLARFFGGPRQGPRQIDIGRLLSQPARELVRGAAQYAAEHGSRDLDTQHLLRAALSSEPTRSLL
SRAGADPDSLASEIDERSGPAQHTPEEAPAPTSLSLTPAVKRALLDAHDLARASGAGYIGPEHVLSALAANPDSAAGHIL
NSARFAPTGPPEAADTAQSRAEHSRATGTPTLDKYGRDLTELARQGRIDPVIGRDEEIEQTIEVLSRRGKNNPVLIGDAG
VGKTAIVEGLAQRIADGDVPDVLIGRRVVALDLTGVVAGTRYRGDFEERLNNIVGEIRAHSDQLIVFIDEVHTVVGAGGG
GEGGAMDAGNILKPALARGELHIVGATTLEEFRRIEKDAALARRFQPILVPEPSVPDTIEILRGLRDRYEAHHQVRYADE
ALVAAVELSDRYLTDRRLPDKAIDLIDQAGARVRLRARTKGTDVRALEREIEQLTCDKDQAVADEKYETATQLRDRIAEL
KVRIADTSGGDEADEGQLEVTAEAIAEVVSRQTGIPVSSLTQEEKEKLLRLAEHLHERVVGQEEAVDVVAEAVMRSRAGL
ASPDRPIGSFLFLGPTGVGKTELARALAEALFGSEERMVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEVVRRHPY
SLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEAITRRGAGIGFGAGGADADEEARREQIL
RPLREHFRPEFLNRIDEIVVFRQLTGDQLRRITNLLLERTRRLLQAQGVTVEFTDPAVDWLAERGYQPEYGARPLRRTIQ
REVDNRLSRLLLDGRVGEGGRVTVDVEDGRLAFRTEDLPTAPEL
MTSGFSGPEGYDAFGEFLARFFGGPRQGPRQIDIGRLLSQPARELVRGAAQYAAEHGSRDLDTQHLLRAALSSEPTRSLL
SRAGADPDSLASEIDERSGPAQHTPEEAPAPTSLSLTPAVKRALLDAHDLARASGAGYIGPEHVLSALAANPDSAAGHIL
NSARFAPTGPPEAADTAQSRAEHSRATGTPTLDKYGRDLTELARQGRIDPVIGRDEEIEQTIEVLSRRGKNNPVLIGDAG
VGKTAIVEGLAQRIADGDVPDVLIGRRVVALDLTGVVAGTRYRGDFEERLNNIVGEIRAHSDQLIVFIDEVHTVVGAGGG
GEGGAMDAGNILKPALARGELHIVGATTLEEFRRIEKDAALARRFQPILVPEPSVPDTIEILRGLRDRYEAHHQVRYADE
ALVAAVELSDRYLTDRRLPDKAIDLIDQAGARVRLRARTKGTDVRALEREIEQLTCDKDQAVADEKYETATQLRDRIAEL
KVRIADTSGGDEADEGQLEVTAEAIAEVVSRQTGIPVSSLTQEEKEKLLRLAEHLHERVVGQEEAVDVVAEAVMRSRAGL
ASPDRPIGSFLFLGPTGVGKTELARALAEALFGSEERMVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEVVRRHPY
SLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEAITRRGAGIGFGAGGADADEEARREQIL
RPLREHFRPEFLNRIDEIVVFRQLTGDQLRRITNLLLERTRRLLQAQGVTVEFTDPAVDWLAERGYQPEYGARPLRRTIQ
REVDNRLSRLLLDGRVGEGGRVTVDVEDGRLAFRTEDLPTAPEL
Nucleotide
Download Length: 2535 bp
>NTDB_id=650477 OG996_RS09225 WP_266524993.1 1949301..1951835(+) (clpC) [Streptomyces sp. NBC_00366]
ATGACCAGCGGCTTCAGCGGACCAGAAGGCTATGACGCCTTCGGAGAATTCCTCGCCCGCTTCTTCGGCGGCCCGCGTCA
GGGCCCCCGCCAGATCGACATAGGGAGGCTGCTGAGCCAGCCCGCCCGGGAACTGGTCCGCGGCGCCGCCCAGTATGCGG
CCGAGCACGGCAGCCGGGACCTCGACACCCAGCATCTGCTGCGTGCCGCGCTCTCCAGCGAGCCGACCCGGAGTCTGCTC
AGCCGGGCCGGCGCAGACCCCGACTCACTGGCGTCGGAGATCGACGAGCGCTCCGGCCCTGCCCAGCACACGCCGGAGGA
GGCGCCTGCGCCCACCTCGCTCTCCCTAACCCCCGCGGTCAAGCGTGCCCTCCTCGACGCCCACGACCTGGCGCGGGCGA
GCGGAGCCGGCTACATCGGCCCCGAGCACGTCCTCAGCGCCCTGGCCGCGAACCCCGACTCGGCCGCCGGGCACATCCTC
AACTCGGCCCGTTTCGCGCCCACCGGGCCGCCCGAGGCGGCGGACACCGCCCAGAGCCGGGCCGAGCACTCCCGCGCCAC
GGGCACGCCCACCCTGGACAAGTACGGTCGCGACCTCACCGAGCTGGCCCGGCAGGGCCGTATCGACCCGGTGATCGGGC
GGGACGAGGAGATCGAGCAGACCATCGAGGTGCTGTCGCGACGCGGCAAGAACAACCCGGTGCTCATCGGGGACGCGGGC
GTCGGCAAGACCGCCATCGTGGAGGGGCTCGCGCAGCGCATCGCCGACGGGGACGTGCCCGACGTGCTGATCGGGCGGCG
GGTCGTCGCCCTCGACCTGACGGGGGTCGTCGCCGGCACCCGCTACCGGGGTGACTTCGAGGAACGTCTGAACAACATCG
TCGGTGAAATCCGGGCCCACTCCGACCAGTTGATCGTCTTCATCGACGAGGTGCACACCGTCGTCGGCGCCGGAGGCGGT
GGCGAGGGCGGGGCGATGGACGCCGGGAACATCCTGAAGCCGGCCCTCGCCCGCGGCGAGCTGCACATCGTCGGCGCCAC
CACGCTGGAGGAGTTCCGCCGGATCGAGAAGGACGCGGCGCTGGCCCGCCGCTTCCAGCCGATCCTGGTGCCCGAACCGT
CCGTGCCGGACACCATCGAGATCCTGCGCGGGCTGCGCGACCGCTACGAGGCCCACCACCAGGTCCGCTACGCCGACGAG
GCCCTGGTGGCCGCGGTCGAGCTGTCCGACCGCTACCTCACCGACCGCCGGCTGCCCGACAAGGCCATCGACCTGATCGA
CCAGGCCGGAGCCCGGGTACGGCTGCGGGCACGCACGAAGGGCACGGACGTACGGGCCCTGGAGCGCGAGATCGAGCAGC
TGACCTGCGACAAGGACCAGGCGGTCGCCGACGAGAAGTACGAGACGGCGACTCAACTGCGCGATCGTATCGCCGAGTTG
AAGGTGCGGATCGCGGACACCTCGGGTGGTGACGAGGCCGACGAGGGGCAGTTGGAGGTGACCGCCGAGGCGATCGCCGA
GGTGGTGTCCCGGCAGACGGGCATCCCGGTCAGCAGCCTCACCCAGGAGGAGAAGGAGAAGCTGCTTCGCCTGGCGGAGC
ACCTGCACGAGCGGGTCGTCGGACAGGAGGAGGCCGTCGACGTGGTCGCCGAGGCGGTCATGCGCTCCCGCGCCGGGCTC
GCGAGCCCCGACCGGCCGATCGGCAGCTTCCTCTTCCTCGGTCCGACCGGCGTCGGCAAGACCGAGCTGGCCCGCGCACT
CGCCGAGGCCCTGTTCGGCAGCGAGGAGCGCATGGTCCGCCTGGACATGAGCGAGTACCAGGAACGGCACACCGTCAGCC
GGCTGGTCGGCGCCCCGCCCGGCTACGTCGGCCACGAGGAGGCCGGCCAGCTCACCGAGGTCGTACGACGCCACCCGTAC
TCGCTCCTCCTGCTCGACGAGGTCGAGAAGGCGCACCCGGACGTCTTCAACATCCTGCTCCAGGTGCTCGACGACGGGCG
GCTCACCGACTCCCAGGGCCGCACGGTCGACTTCACCAACACGGTCATCGTGATGACCAGCAACCTCGGCTCCGAGGCGA
TCACCCGGCGCGGCGCCGGCATCGGCTTCGGAGCGGGCGGCGCCGACGCCGACGAGGAGGCGCGGCGCGAGCAGATCCTC
CGCCCCCTGCGCGAGCACTTCCGGCCCGAGTTCCTCAACCGCATCGACGAGATCGTCGTCTTCCGCCAGCTCACCGGCGA
CCAACTGCGCCGGATCACCAACCTGTTGCTGGAGAGGACCCGCCGTCTGCTGCAGGCACAGGGCGTCACGGTGGAGTTCA
CGGACCCGGCTGTCGACTGGCTCGCCGAGCGCGGCTACCAGCCCGAGTACGGTGCCCGCCCGCTGCGCCGCACCATCCAG
CGCGAGGTCGACAACCGGCTGTCGCGGCTGCTGCTCGACGGCCGGGTCGGCGAGGGCGGCCGGGTGACGGTGGACGTCGA
GGACGGCCGGCTGGCCTTCCGCACGGAGGACCTGCCGACCGCCCCCGAACTCTGA
ATGACCAGCGGCTTCAGCGGACCAGAAGGCTATGACGCCTTCGGAGAATTCCTCGCCCGCTTCTTCGGCGGCCCGCGTCA
GGGCCCCCGCCAGATCGACATAGGGAGGCTGCTGAGCCAGCCCGCCCGGGAACTGGTCCGCGGCGCCGCCCAGTATGCGG
CCGAGCACGGCAGCCGGGACCTCGACACCCAGCATCTGCTGCGTGCCGCGCTCTCCAGCGAGCCGACCCGGAGTCTGCTC
AGCCGGGCCGGCGCAGACCCCGACTCACTGGCGTCGGAGATCGACGAGCGCTCCGGCCCTGCCCAGCACACGCCGGAGGA
GGCGCCTGCGCCCACCTCGCTCTCCCTAACCCCCGCGGTCAAGCGTGCCCTCCTCGACGCCCACGACCTGGCGCGGGCGA
GCGGAGCCGGCTACATCGGCCCCGAGCACGTCCTCAGCGCCCTGGCCGCGAACCCCGACTCGGCCGCCGGGCACATCCTC
AACTCGGCCCGTTTCGCGCCCACCGGGCCGCCCGAGGCGGCGGACACCGCCCAGAGCCGGGCCGAGCACTCCCGCGCCAC
GGGCACGCCCACCCTGGACAAGTACGGTCGCGACCTCACCGAGCTGGCCCGGCAGGGCCGTATCGACCCGGTGATCGGGC
GGGACGAGGAGATCGAGCAGACCATCGAGGTGCTGTCGCGACGCGGCAAGAACAACCCGGTGCTCATCGGGGACGCGGGC
GTCGGCAAGACCGCCATCGTGGAGGGGCTCGCGCAGCGCATCGCCGACGGGGACGTGCCCGACGTGCTGATCGGGCGGCG
GGTCGTCGCCCTCGACCTGACGGGGGTCGTCGCCGGCACCCGCTACCGGGGTGACTTCGAGGAACGTCTGAACAACATCG
TCGGTGAAATCCGGGCCCACTCCGACCAGTTGATCGTCTTCATCGACGAGGTGCACACCGTCGTCGGCGCCGGAGGCGGT
GGCGAGGGCGGGGCGATGGACGCCGGGAACATCCTGAAGCCGGCCCTCGCCCGCGGCGAGCTGCACATCGTCGGCGCCAC
CACGCTGGAGGAGTTCCGCCGGATCGAGAAGGACGCGGCGCTGGCCCGCCGCTTCCAGCCGATCCTGGTGCCCGAACCGT
CCGTGCCGGACACCATCGAGATCCTGCGCGGGCTGCGCGACCGCTACGAGGCCCACCACCAGGTCCGCTACGCCGACGAG
GCCCTGGTGGCCGCGGTCGAGCTGTCCGACCGCTACCTCACCGACCGCCGGCTGCCCGACAAGGCCATCGACCTGATCGA
CCAGGCCGGAGCCCGGGTACGGCTGCGGGCACGCACGAAGGGCACGGACGTACGGGCCCTGGAGCGCGAGATCGAGCAGC
TGACCTGCGACAAGGACCAGGCGGTCGCCGACGAGAAGTACGAGACGGCGACTCAACTGCGCGATCGTATCGCCGAGTTG
AAGGTGCGGATCGCGGACACCTCGGGTGGTGACGAGGCCGACGAGGGGCAGTTGGAGGTGACCGCCGAGGCGATCGCCGA
GGTGGTGTCCCGGCAGACGGGCATCCCGGTCAGCAGCCTCACCCAGGAGGAGAAGGAGAAGCTGCTTCGCCTGGCGGAGC
ACCTGCACGAGCGGGTCGTCGGACAGGAGGAGGCCGTCGACGTGGTCGCCGAGGCGGTCATGCGCTCCCGCGCCGGGCTC
GCGAGCCCCGACCGGCCGATCGGCAGCTTCCTCTTCCTCGGTCCGACCGGCGTCGGCAAGACCGAGCTGGCCCGCGCACT
CGCCGAGGCCCTGTTCGGCAGCGAGGAGCGCATGGTCCGCCTGGACATGAGCGAGTACCAGGAACGGCACACCGTCAGCC
GGCTGGTCGGCGCCCCGCCCGGCTACGTCGGCCACGAGGAGGCCGGCCAGCTCACCGAGGTCGTACGACGCCACCCGTAC
TCGCTCCTCCTGCTCGACGAGGTCGAGAAGGCGCACCCGGACGTCTTCAACATCCTGCTCCAGGTGCTCGACGACGGGCG
GCTCACCGACTCCCAGGGCCGCACGGTCGACTTCACCAACACGGTCATCGTGATGACCAGCAACCTCGGCTCCGAGGCGA
TCACCCGGCGCGGCGCCGGCATCGGCTTCGGAGCGGGCGGCGCCGACGCCGACGAGGAGGCGCGGCGCGAGCAGATCCTC
CGCCCCCTGCGCGAGCACTTCCGGCCCGAGTTCCTCAACCGCATCGACGAGATCGTCGTCTTCCGCCAGCTCACCGGCGA
CCAACTGCGCCGGATCACCAACCTGTTGCTGGAGAGGACCCGCCGTCTGCTGCAGGCACAGGGCGTCACGGTGGAGTTCA
CGGACCCGGCTGTCGACTGGCTCGCCGAGCGCGGCTACCAGCCCGAGTACGGTGCCCGCCCGCTGCGCCGCACCATCCAG
CGCGAGGTCGACAACCGGCTGTCGCGGCTGCTGCTCGACGGCCGGGTCGGCGAGGGCGGCCGGGTGACGGTGGACGTCGA
GGACGGCCGGCTGGCCTTCCGCACGGAGGACCTGCCGACCGCCCCCGAACTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
49.506 |
95.972 |
0.475 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.018 |
98.697 |
0.444 |
| clpC | Streptococcus pneumoniae Rx1 |
44.778 |
98.697 |
0.442 |
| clpC | Streptococcus pneumoniae D39 |
44.778 |
98.697 |
0.442 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.926 |
96.564 |
0.424 |
| clpC | Streptococcus mutans UA159 |
42.806 |
98.815 |
0.423 |
| clpC | Streptococcus thermophilus LMD-9 |
46.277 |
89.1 |
0.412 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.011 |
89.1 |
0.41 |
| clpE | Streptococcus mutans UA159 |
53.376 |
73.697 |
0.393 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50.769 |
77.014 |
0.391 |
| clpE | Streptococcus pneumoniae R6 |
51.364 |
73.815 |
0.379 |
| clpE | Streptococcus pneumoniae D39 |
51.364 |
73.815 |
0.379 |
| clpE | Streptococcus pneumoniae Rx1 |
51.364 |
73.815 |
0.379 |
| clpE | Streptococcus pneumoniae TIGR4 |
51.364 |
73.815 |
0.379 |