Detailed information NTG0650472

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z10_RS13555
• Genome accession: NZ_CP091364
• Coordinates: 2797208..2797909 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AB173-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2792208..2802909

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z10_RS13520 (L2Z10_13520)	kdsB	2792731..2793492 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2Z10_RS13525 (L2Z10_13525)	-	2793504..2794484 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
L2Z10_RS13530 (L2Z10_13530)	-	2794496..2794837 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
L2Z10_RS13535 (L2Z10_13535)	-	2794855..2795628 (+)	774	WP_000497298.1	TatD family hydrolase	-
L2Z10_RS13540 (L2Z10_13540)	-	2795666..2796274 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z10_RS13545 (L2Z10_13545)	-	2796284..2796838 (+)	555	WP_000841373.1	type II secretion system protein	-
L2Z10_RS13550 (L2Z10_13550)	xcpV	2796828..2797208 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z10_RS13555 (L2Z10_13555)	xcpW	2797208..2797909 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z10_RS13560 (L2Z10_13560)	gspK	2797909..2798868 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
L2Z10_RS13565 (L2Z10_13565)	-	2799099..2799695 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
L2Z10_RS13570 (L2Z10_13570)	ung	2799746..2800459 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
L2Z10_RS13575 (L2Z10_13575)	-	2800456..2801580 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z10_RS13580 (L2Z10_13580)	tadA	2801587..2802090 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
L2Z10_RS13585 (L2Z10_13585)	-	2802160..2802603 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=650472 L2Z10_RS13555 WP_000594589.1 2797208..2797909(+) (xcpW) [Acinetobacter baumannii strain AB173-VUB]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=650472 L2Z10_RS13555 WP_000594589.1 2797208..2797909(+) (xcpW) [Acinetobacter baumannii strain AB173-VUB]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996