Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   L2Z10_RS05385 Genome accession   NZ_CP091364
Coordinates   1121766..1122920 (-) Length   384 a.a.
NCBI ID   WP_000755281.1    Uniprot ID   A0A059ZKS3
Organism   Acinetobacter baumannii strain AB173-VUB     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1116766..1127920
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2Z10_RS05365 (L2Z10_05365) - 1117928..1118578 (+) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -
  L2Z10_RS05370 (L2Z10_05370) - 1118684..1119604 (+) 921 WP_002000451.1 DMT family transporter -
  L2Z10_RS05375 (L2Z10_05375) - 1119995..1120564 (-) 570 WP_000633612.1 Sua5/YciO/YrdC/YwlC family protein -
  L2Z10_RS05380 (L2Z10_05380) dprA 1120615..1121745 (-) 1131 WP_031947056.1 DNA-processing protein DprA Machinery gene
  L2Z10_RS05385 (L2Z10_05385) tsaP 1121766..1122920 (-) 1155 WP_000755281.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  L2Z10_RS05390 (L2Z10_05390) def 1123043..1123573 (+) 531 WP_001196539.1 peptide deformylase -
  L2Z10_RS05395 (L2Z10_05395) - 1123610..1124038 (+) 429 WP_000231981.1 DUF2946 family protein -
  L2Z10_RS05400 (L2Z10_05400) - 1124111..1126192 (+) 2082 WP_066011887.1 TonB-dependent copper receptor -
  L2Z10_RS05405 (L2Z10_05405) - 1126242..1126448 (+) 207 WP_000182542.1 hypothetical protein -
  L2Z10_RS05410 (L2Z10_05410) - 1126518..1127732 (-) 1215 WP_001177956.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42350.28 Da        Isoelectric Point: 8.5816

>NTDB_id=650451 L2Z10_RS05385 WP_000755281.1 1121766..1122920(-) (tsaP) [Acinetobacter baumannii strain AB173-VUB]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=650451 L2Z10_RS05385 WP_000755281.1 1121766..1122920(-) (tsaP) [Acinetobacter baumannii strain AB173-VUB]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTCGGTATTATTCGCCGCTATACAGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCAGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGATTCAATTACCAACACACCTTATATTGTTGGTACCGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAACTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGCTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTGATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A059ZKS3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

99.479

100

0.995