Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   OHT17_RS21875 Genome accession   NZ_CP107967
Coordinates   4745628..4746602 (-) Length   324 a.a.
NCBI ID   WP_326711333.1    Uniprot ID   A0ABV4SR33
Organism   Streptomyces sp. NBC_00371     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 4740628..4751602
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHT17_RS21855 (OHT17_21870) mshB 4740985..4741878 (-) 894 WP_326711330.1 N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase -
  OHT17_RS21860 (OHT17_21875) - 4741910..4742104 (-) 195 WP_100596611.1 hypothetical protein -
  OHT17_RS21865 (OHT17_21880) - 4742270..4744402 (+) 2133 WP_326711331.1 prolyl oligopeptidase family serine peptidase -
  OHT17_RS21870 (OHT17_21885) - 4744562..4745635 (-) 1074 WP_326711332.1 dipeptide ABC transporter ATP-binding protein -
  OHT17_RS21875 (OHT17_21890) amiE 4745628..4746602 (-) 975 WP_326711333.1 ABC transporter ATP-binding protein Regulator
  OHT17_RS21880 (OHT17_21895) - 4746609..4747556 (-) 948 WP_326715973.1 ABC transporter permease -
  OHT17_RS21885 (OHT17_21900) - 4747645..4748568 (-) 924 WP_326711334.1 ABC transporter permease -
  OHT17_RS21890 (OHT17_21905) - 4748632..4750266 (-) 1635 WP_326711335.1 ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 324 a.a.        Molecular weight: 35461.30 Da        Isoelectric Point: 6.1043

>NTDB_id=650325 OHT17_RS21875 WP_326711333.1 4745628..4746602(-) (amiE) [Streptomyces sp. NBC_00371]
MLLEVRDLHVEFRTREGIASAVNGVSYTVDEGETLAVLGESGSGKSVTAQAIMGILDVPPGKIAGGEILFQGTDLLKLKE
DERRKIRGAKMAMIFQDALSSLNPVLSVGEQLGEMFTVHKGMSRKDAKAKAIELMDHVRIPAAKERVGQYPHQFSGGMRQ
RIMIAMALALEPDLIIADEPTTALDVTVQAQVMELLAELQRELRMGLILITHDLGVVADVADKIAVMYAGRIVETAPVHE
IYKAPAHPYTKGLLESIPRLDQKGQELYAIKGLPPNLMHIPPGCAFNPRCPMAQDVCRADVPPLFEVSPTRRSACYFWKE
TLDG

Nucleotide


Download         Length: 975 bp        

>NTDB_id=650325 OHT17_RS21875 WP_326711333.1 4745628..4746602(-) (amiE) [Streptomyces sp. NBC_00371]
ATGCTGCTCGAAGTGCGCGATCTGCACGTGGAGTTCCGGACGCGCGAGGGGATCGCCAGCGCCGTCAACGGCGTCAGCTA
CACCGTCGACGAGGGCGAGACCCTGGCCGTGCTCGGCGAGTCGGGGTCCGGCAAGTCCGTGACCGCCCAGGCGATCATGG
GCATCCTCGATGTCCCGCCCGGGAAGATCGCCGGCGGCGAGATCCTTTTCCAGGGCACGGACCTCCTCAAGCTCAAGGAG
GACGAGCGGCGCAAGATCCGCGGCGCGAAGATGGCGATGATCTTCCAGGACGCGCTCAGCTCCCTCAACCCCGTGCTGTC
CGTGGGCGAGCAGCTCGGCGAGATGTTCACCGTCCACAAGGGGATGTCCCGCAAGGACGCCAAGGCCAAGGCCATCGAGC
TGATGGACCACGTCAGGATCCCCGCCGCCAAGGAGCGGGTCGGCCAGTACCCGCACCAGTTCAGCGGCGGCATGCGCCAG
CGCATCATGATCGCGATGGCACTCGCCCTGGAACCGGACCTGATCATCGCCGACGAGCCCACCACCGCCCTCGACGTCAC
CGTCCAGGCCCAGGTCATGGAGCTGCTCGCCGAACTCCAGCGCGAGCTCAGGATGGGCCTCATCCTCATCACGCACGACC
TCGGCGTGGTCGCCGACGTCGCCGACAAGATCGCCGTCATGTACGCGGGCCGCATCGTCGAGACGGCGCCCGTGCACGAG
ATCTACAAGGCGCCCGCCCACCCGTACACCAAGGGCCTGCTCGAATCGATCCCGCGCCTGGACCAGAAGGGCCAGGAGCT
GTACGCGATCAAGGGCCTGCCGCCCAACCTGATGCACATCCCGCCCGGCTGCGCCTTCAACCCGCGCTGCCCGATGGCCC
AGGACGTGTGCCGCGCGGACGTACCCCCGCTCTTCGAGGTGAGCCCCACGCGCCGGAGCGCCTGCTACTTCTGGAAGGAG
ACGCTCGATGGCTGA

Domains

Predicted by InterProScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(233-297)

ABC transporter (ABC_tran)

(23-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

48.91

99.074

0.485
  amiE Streptococcus thermophilus LMG 18311

48.287

99.074

0.478
  amiE Streptococcus thermophilus LMD-9

48.287

99.074

0.478
  oppD Streptococcus mutans UA159

47.152

97.531

0.46