Detailed information NTG0650323

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z14_RS09560
• Genome accession: NZ_CP091360
• Coordinates: 1988941..1989642 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594588.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain AB179-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1983941..1994642

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z14_RS09525 (L2Z14_09525)	kdsB	1984464..1985225 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2Z14_RS09530 (L2Z14_09530)	-	1985237..1986217 (+)	981	WP_001075419.1	DNA polymerase III subunit delta'	-
L2Z14_RS09535 (L2Z14_09535)	-	1986229..1986570 (+)	342	WP_049581987.1	PilZ domain-containing protein	-
L2Z14_RS09540 (L2Z14_09540)	-	1986588..1987361 (+)	774	WP_000497301.1	TatD family hydrolase	-
L2Z14_RS09545 (L2Z14_09545)	-	1987399..1988007 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z14_RS09550 (L2Z14_09550)	-	1988017..1988571 (+)	555	WP_000841372.1	type II secretion system protein	-
L2Z14_RS09555 (L2Z14_09555)	xcpV	1988561..1988941 (+)	381	WP_000836909.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z14_RS09560 (L2Z14_09560)	xcpW	1988941..1989642 (+)	702	WP_000594588.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z14_RS09565 (L2Z14_09565)	gspK	1989642..1990601 (+)	960	WP_001218621.1	type II secretion system minor pseudopilin GspK	-
L2Z14_RS09570 (L2Z14_09570)	-	1990831..1991427 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
L2Z14_RS09575 (L2Z14_09575)	ung	1991478..1992191 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
L2Z14_RS09580 (L2Z14_09580)	-	1992188..1993312 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z14_RS09585 (L2Z14_09585)	tadA	1993319..1993822 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
L2Z14_RS09590 (L2Z14_09590)	-	1993892..1994335 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26625.55 Da
• Isoelectric Point: 9.3468

>NTDB_id=650323 L2Z14_RS09560 WP_000594588.1 1988941..1989642(+) (xcpW) [Acinetobacter baumannii strain AB179-VUB]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQDGNS

Nucleotide

• Length: 702 bp

>NTDB_id=650323 L2Z14_RS09560 WP_000594588.1 1988941..1989642(+) (xcpW) [Acinetobacter baumannii strain AB179-VUB]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATACCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGACGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991