Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHS71_RS18385 Genome accession   NZ_CP107958
Coordinates   4089992..4091116 (+) Length   374 a.a.
NCBI ID   WP_328480458.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00377     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4084992..4096116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHS71_RS18370 (OHS71_18355) - 4085642..4086421 (+) 780 WP_328484555.1 hypothetical protein -
  OHS71_RS18375 (OHS71_18360) - 4086474..4088225 (-) 1752 WP_328480456.1 hypothetical protein -
  OHS71_RS18380 (OHS71_18365) radA/sms 4088502..4089911 (+) 1410 WP_328480457.1 DNA repair protein RadA Machinery gene
  OHS71_RS18385 (OHS71_18370) disA 4089992..4091116 (+) 1125 WP_328480458.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHS71_RS18390 (OHS71_18375) - 4091287..4092153 (-) 867 WP_328480459.1 hypothetical protein -
  OHS71_RS18395 (OHS71_18380) - 4092415..4093347 (+) 933 WP_328480460.1 A/G-specific adenine glycosylase -
  OHS71_RS18400 (OHS71_18385) - 4093648..4094190 (+) 543 WP_190149519.1 SigE family RNA polymerase sigma factor -
  OHS71_RS18405 (OHS71_18390) - 4094175..4094834 (+) 660 WP_328480461.1 hypothetical protein -
  OHS71_RS18410 (OHS71_18395) cseB 4095107..4095808 (+) 702 WP_328480462.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40015.82 Da        Isoelectric Point: 5.0025

>NTDB_id=650167 OHS71_RS18385 WP_328480458.1 4089992..4091116(+) (disA) [Streptomyces sp. NBC_00377]
MAANDRAAAPGKSGGSSGAEGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLNVEFAATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPMIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELDALSHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=650167 OHS71_RS18385 WP_328480458.1 4089992..4091116(+) (disA) [Streptomyces sp. NBC_00377]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGTGGGAGTTCCGGTGCCGAGGGCCTGATGCGCGCCGCGCT
GAGCGCGGTGGCTCCCGGCACGGCCCTGCGTGACGGACTGGAACGGATCCTCCGCGGCAACACCGGCGGGCTCATCGTGC
TGGGCTCCGACAAGACGGTCGAGGCGATGTGTACGGGCGGGTTCGTCCTGAACGTGGAGTTCGCGGCCACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCGGACCTGTCGAAGATCCTGCGGGCCGGCGTCCAGCTGGTACC
GGACCCCATGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACCGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCCG
TGGTCTCGGTCTCCCAGTCCATGCGGCTGATCGCCCTCTACGTCGACGGGCAGCGCCGCGTCCTGGAGGATTCCGCGGCG
ATCCTGTCCCGTGCGAACCAGGCACTGGCGACCCTCGAGCGGTACAAGCTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTGGTCACGGTCCGGGACGTCTCCGCGGTGGCCCAGCGCCTGGAGATGGTGCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACGGACGGCCGTCTGCTCGCCCTTCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTGGTCCGGGACTACGTGCCGGAACCCACGGCGAAGCGGTCCCGCACGGTCGACGA
GGCGCTGTACGAGCTGGACGCGCTCAGCCACGCCGAACTGCTCGAACTCTCCACGGTGGCCCGCGCGTTGGGTTACACCG
GCTCCCCCGAGGCACTGGACTCGGCGGTCTCGCCCCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGCCTGCCGGGTGCC
ATCATCGACCGGCTCGTCGAGCACTTCGGCGGACTCCAGAAGCTCCTCGCCGCGAGTGTCGACGACCTCCAGACGGTGGA
CGGCGTGGGCGAGGCAAGGGCCCGCAGCGTCCGCGAGGGCCTGTCAAGGCTGGCCGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.286

93.583

0.433