Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   L2Z22_RS17985 Genome accession   NZ_CP091353
Coordinates   3715721..3716875 (-) Length   384 a.a.
NCBI ID   WP_000755268.1    Uniprot ID   A0A9P3CTL8
Organism   Acinetobacter baumannii strain AB189-VUB     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3710721..3721875
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2Z22_RS17965 (L2Z22_17960) - 3711883..3712533 (+) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -
  L2Z22_RS17970 (L2Z22_17965) - 3712639..3713559 (+) 921 WP_002023238.1 DMT family transporter -
  L2Z22_RS17975 (L2Z22_17970) - 3713950..3714519 (-) 570 WP_000633612.1 Sua5/YciO/YrdC/YwlC family protein -
  L2Z22_RS17980 (L2Z22_17975) dprA 3714570..3715700 (-) 1131 WP_002019199.1 DNA-processing protein DprA Machinery gene
  L2Z22_RS17985 (L2Z22_17980) tsaP 3715721..3716875 (-) 1155 WP_000755268.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  L2Z22_RS17990 (L2Z22_17985) def 3716998..3717528 (+) 531 WP_001196539.1 peptide deformylase -
  L2Z22_RS17995 (L2Z22_17990) - 3717565..3717993 (+) 429 WP_000231984.1 DUF2946 family protein -
  L2Z22_RS18000 (L2Z22_17995) - 3718066..3720180 (+) 2115 WP_001120667.1 TonB-dependent copper receptor -
  L2Z22_RS18005 (L2Z22_18000) - 3720234..3720440 (+) 207 WP_000182542.1 hypothetical protein -
  L2Z22_RS18010 (L2Z22_18005) - 3720510..3721724 (-) 1215 WP_001177962.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42364.30 Da        Isoelectric Point: 8.5816

>NTDB_id=650140 L2Z22_RS17985 WP_000755268.1 3715721..3716875(-) (tsaP) [Acinetobacter baumannii strain AB189-VUB]
MKKVFNGMVNFHALGIKKHLLALALCTGIAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=650140 L2Z22_RS17985 WP_000755268.1 3715721..3716875(-) (tsaP) [Acinetobacter baumannii strain AB189-VUB]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC
AGGTATCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTAGGTATTATTCGCCGCTACACTGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATATTGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGCTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGTTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGACCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

99.219

100

0.992