Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG959_RS07750 Genome accession   NZ_CP107951
Coordinates   1783193..1783987 (+) Length   264 a.a.
NCBI ID   WP_326657450.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00385     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1778193..1788987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG959_RS07735 (OG959_07750) - 1778379..1778915 (+) 537 WP_326657447.1 TerD family protein -
  OG959_RS07740 (OG959_07755) - 1779029..1781935 (-) 2907 WP_326657449.1 vitamin B12-dependent ribonucleotide reductase -
  OG959_RS07745 (OG959_07760) nrdR 1782101..1782613 (-) 513 WP_148021323.1 transcriptional regulator NrdR -
  OG959_RS07750 (OG959_07765) dinR/lexA 1783193..1783987 (+) 795 WP_326657450.1 transcriptional repressor LexA Regulator
  OG959_RS07755 (OG959_07770) - 1784070..1786040 (-) 1971 WP_326657451.1 ATP-dependent DNA helicase -
  OG959_RS07760 (OG959_07775) - 1786091..1788004 (-) 1914 WP_326657453.1 IucA/IucC family siderophore biosynthesis protein -
  OG959_RS07765 (OG959_07780) - 1788065..1788772 (-) 708 WP_326657454.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 28580.30 Da        Isoelectric Point: 6.9854

>NTDB_id=650063 OG959_RS07750 WP_326657450.1 1783193..1783987(+) (dinR/lexA) [Streptomyces sp. NBC_00385]
MTTTADSAIITAQDRSQSRLEPVHAMNDSGTNTEGPEPARPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYP
PSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQPTDTTGKPAASYVPLVGRIAAGGPILAE
ESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHN
SAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=650063 OG959_RS07750 WP_326657450.1 1783193..1783987(+) (dinR/lexA) [Streptomyces sp. NBC_00385]
GTGACCACCACCGCAGACAGTGCCATCATCACTGCCCAGGACCGCTCCCAGAGCCGACTCGAGCCGGTGCATGCCATGAA
TGACTCAGGCACGAACACGGAGGGGCCGGAGCCCGCGCGCCCAGCGCGCTCGCTGCCCGGACGACCTCCTGGAATCCGGG
CGGACAGCTCGGGGCTCACGGACCGGCAGCGGCGAGTGATCGAAGTCATCCGGGACTCCGTACAACGGCGGGGCTACCCC
CCGTCGATGCGGGAGATCGGTCAGGCGGTGGGCCTGTCCAGCACGTCCTCCGTCGCACACCAGCTGATGGCTCTGGAGCG
CAAGGGCTTCCTGCGCCGCGACCCCCACCGCCCGAGGGCGTACGAGGTGCGCGGCTCCGACCAGCCCAGCACCCAGCCCA
CGGACACCACCGGGAAGCCCGCGGCGTCGTACGTGCCGCTGGTCGGCCGGATCGCGGCCGGTGGGCCGATCCTCGCCGAG
GAATCGGTGGAGGACGTGTTCCCCCTCCCCCGCCAGCTGGTCGGGGACGGAGAACTGTTCGTGCTGAAGGTCGTCGGTGA
CTCGATGATCGAAGCGGCGATCTGCGACGGGGACTGGGTCACCGTACGACGCCAGCCCGTGGCGGAGAACGGCGACATCG
TGGCCGCCATGCTTGACGGTGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTGTGGCTGCTCCCGCACAAC
TCCGCGTACCAGCCGATTCCCGGCGACGAGGCGACGATCCTCGGCAAGGTCGTGGCGGTGCTGCGGCGGGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(146-258)

LexA DNA binding domain (LexA_DNA_bind)

(57-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80.303

0.371