Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG780_RS18875 Genome accession   NZ_CP107950
Coordinates   4310303..4311427 (+) Length   374 a.a.
NCBI ID   WP_326786298.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00386     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4305303..4316427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG780_RS18860 (OG780_18835) - 4305755..4306594 (+) 840 WP_328449699.1 hypothetical protein -
  OG780_RS18865 (OG780_18840) - 4306683..4308482 (-) 1800 WP_328449700.1 hypothetical protein -
  OG780_RS18870 (OG780_18845) radA/sms 4308825..4310234 (+) 1410 WP_328449701.1 DNA repair protein RadA Machinery gene
  OG780_RS18875 (OG780_18850) disA 4310303..4311427 (+) 1125 WP_326786298.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG780_RS18880 (OG780_18855) - 4311543..4312382 (-) 840 WP_328449702.1 hypothetical protein -
  OG780_RS18885 (OG780_18860) - 4312574..4313491 (+) 918 WP_328449704.1 A/G-specific adenine glycosylase -
  OG780_RS18890 (OG780_18865) - 4313745..4314284 (+) 540 WP_328449706.1 SigE family RNA polymerase sigma factor -
  OG780_RS18895 (OG780_18870) - 4314272..4314922 (+) 651 WP_328449708.1 hypothetical protein -
  OG780_RS18900 (OG780_18875) cseB 4314942..4315646 (+) 705 WP_328449710.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40041.79 Da        Isoelectric Point: 4.9234

>NTDB_id=650002 OG780_RS18875 WP_326786298.1 4310303..4311427(+) (disA) [Streptomyces sp. NBC_00386]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGYPIVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLTLQLDELIA
GVEPDRELVVRDYVPEPTAKRSRTVDEALSELDALSHAELLELSTVAKALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=650002 OG780_RS18875 WP_326786298.1 4310303..4311427(+) (disA) [Streptomyces sp. NBC_00386]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGCGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCGCACT
CAGCGCCGTGGCACCCGGTACGGCACTGCGCGACGGGCTTGAACGGATTCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGCTCCGACAAGACCGTCGAAGCGATGTGCACGGGCGGTTTCGTCCTGGATGTCGAGTTCACCGCGACCCGTCTGCGT
GAACTGTGCAAGCTCGACGGCGGCATCGTGCTCGACAAGGACATCACCAAGATCCTTCGGGCGGGCGTGCAGCTGGTCCC
CGACCCGACGATCCCGACGGAGGAGACGGGCACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTACCCCA
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCTCTGTACGTCGACGGTCAGCGCCGTGTCCTGGAGGACTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTCGTCACGGTCCGGGACGTCTCCGCGGTCGCCCAGCGTCTGGAGATGGTGCGCCGTATCG
CCACCGAGATCGCCGAGTACGTGGTGGAACTGGGCACGGACGGGCGGCTGCTGACCCTCCAGCTCGACGAGCTGATCGCC
GGCGTCGAGCCCGACCGTGAGCTGGTCGTCCGGGACTACGTGCCCGAGCCGACCGCCAAGCGTTCCCGCACGGTCGACGA
GGCGCTGTCCGAGCTGGACGCGCTCAGTCACGCCGAGCTCCTCGAACTGTCCACGGTGGCAAAGGCTTTGGGCTACACCG
GCTCCCCCGAGGCGCTCGACTCCGCGGTCTCTCCGCGCGGGTTCCGCCTCCTCGCCAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTCGTGGAGCACTTCGGCGGTCTCCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCCCGGGCCCGCAGTGTCCGCGAGGGCCTGTCCCGTCTCGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438