Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | OHS70_RS16165 | Genome accession | NZ_CP107945 |
| Coordinates | 3754236..3756761 (-) | Length | 841 a.a. |
| NCBI ID | WP_328398061.1 | Uniprot ID | - |
| Organism | Streptomyces sp. NBC_00390 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3749236..3761761
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OHS70_RS16150 (OHS70_16170) | - | 3750554..3751126 (+) | 573 | WP_328398055.1 | helix-turn-helix domain-containing protein | - |
| OHS70_RS16155 (OHS70_16175) | - | 3751208..3751909 (-) | 702 | WP_328398057.1 | M23 family metallopeptidase | - |
| OHS70_RS16160 (OHS70_16180) | dacB | 3752500..3754098 (+) | 1599 | WP_328398059.1 | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | - |
| OHS70_RS16165 (OHS70_16185) | clpC | 3754236..3756761 (-) | 2526 | WP_328398061.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| OHS70_RS16170 (OHS70_16190) | - | 3757194..3757784 (+) | 591 | WP_328398063.1 | SCO3374 family protein | - |
| OHS70_RS16175 (OHS70_16195) | - | 3757763..3758098 (-) | 336 | WP_328398065.1 | Lsr2 family protein | - |
| OHS70_RS16180 (OHS70_16200) | - | 3758243..3758764 (-) | 522 | WP_328398067.1 | amino-acid N-acetyltransferase | - |
| OHS70_RS16185 (OHS70_16205) | - | 3758774..3759217 (-) | 444 | WP_328405659.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| OHS70_RS16190 (OHS70_16210) | - | 3759318..3759491 (-) | 174 | WP_328398069.1 | hypothetical protein | - |
| OHS70_RS16195 (OHS70_16215) | - | 3759506..3760090 (-) | 585 | WP_328405661.1 | hypothetical protein | - |
| OHS70_RS16200 (OHS70_16220) | - | 3760642..3761439 (-) | 798 | WP_328398071.1 | type III pantothenate kinase | - |
Sequence
Protein
Download Length: 841 a.a. Molecular weight: 93144.43 Da Isoelectric Point: 5.8278
>NTDB_id=649857 OHS70_RS16165 WP_328398061.1 3754236..3756761(-) (clpC) [Streptomyces sp. NBC_00390]
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEAATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKTKREKEWKAGDMDVVAEVDGELI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
TLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDVKTGYERMKAKVNEELKQHFRPEFLNRVDDTVVFHQLT
EEDIIQIVDLMIAKVDERLKDRDMGIELSADAKSLLAKKGYDPVMGARPLRRTIQREIEDMLSEKILFGELRPGHIVVVD
TEGEGEEKKFTFRGEEKSALPDVPPIEQAAGGTGPNLSKDA
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEAATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKTKREKEWKAGDMDVVAEVDGELI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
TLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDVKTGYERMKAKVNEELKQHFRPEFLNRVDDTVVFHQLT
EEDIIQIVDLMIAKVDERLKDRDMGIELSADAKSLLAKKGYDPVMGARPLRRTIQREIEDMLSEKILFGELRPGHIVVVD
TEGEGEEKKFTFRGEEKSALPDVPPIEQAAGGTGPNLSKDA
Nucleotide
Download Length: 2526 bp
>NTDB_id=649857 OHS70_RS16165 WP_328398061.1 3754236..3756761(-) (clpC) [Streptomyces sp. NBC_00390]
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGCCTTATCCATGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGCCAGGGCCAGCAGGCCCCGTCCGGTCACATTCCCTTC
ACGCCCCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGAGAGGCTCTTCAGCTGGGCCACAACTACATCGGCACCGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGTGAGGGCGTCGCCGCCCAGGTCCTCGTGAAGCTGGGCGCCGATCTCAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGATACCAGGGCAAGGAAGCCGCCACGGCAGGCGGCCCGGCCGAGGGCACG
CCCTCGACCTCGCTCGTCCTGGACCAGTTCGGCCGGAATCTCACCCAGGCCGCTCGTGAGTCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGTACGAAGAACAACCCCGTACTCATCGGCGAGC
CGGGCGTCGGTAAGACGGCGGTCGTCGAAGGCCTGGCGCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTGGACCTCGGTGCGCTGGTCGCCGGCTCCCGCTACCGGGGTGACTTCGAGGAGCGCCTGAAGAA
GGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACCCTGGTGGGTGCGGGTGCCG
CCGAGGGCGCGATCGACGCGGCCTCGATCCTCAAGCCGATGCTGGCGCGAGGCGAGCTGCAGACCATCGGCGCCACCACG
CTGGACGAGTACCGCAAGCACCTGGAGAAGGACGCCGCGCTCGAGCGCCGCTTCCAGCCCATCCAGGTCGCGGAGCCGTC
GCTGCCGCACACCATCGAGATCCTCAAGGGTCTGCGCGACCGCTACGAGGCCCACCATCGTGTCTCCATCACGGACGAGG
CGCTGGTCCAGGCCGCGACCCTGGCCGACCGGTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGCTCCCGGATGCGTATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGCCGGTGT
CCGCCGTGACAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGAAGGCAGCTTCGCTCCGTGACAAGGAGAAGCAGCTGC
TGGCCGCGAAGACCAAGCGCGAGAAGGAATGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAGCTGATC
GCCGAGGTCCTGGCGACCGCCACCGGCATTCCGGTCTTCAAGCTGACCGAGGAGGAGTCCTCGCGTCTGCTGCGCATGGA
GGACGAGCTCCACAAGCGCGTCATCGGGCAGAAGGACGCCATCAAGGCCCTTTCGCAGGCGATCCGCCGTACGCGAGCCG
GCCTGAAGGACCCGAAGCGCCCCGGTGGCTCGTTCATCTTCGCCGGTCCGTCCGGTGTCGGTAAGACCGAGCTCTCCAAG
ACGCTCGCCGAATTCCTCTTCGGCGACGAGGACGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACACGGT
TTCCCGTCTCTTCGGTTCGCCCCCCGGATACGTGGGTTACGAAGAGGGCGGTCAGCTCACAGAGAAGGTGCGCCGCAAGC
CGTTCTCCGTCGTCCTCTTCGACGAGGTGGAGAAGGCCCACCCCGATATCTTCAATTCCCTTCTGCAGATCCTGGAGGAC
GGTCGCCTGACCGACTCCCAGGGCCGCGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGGACCCG
GGACATCTCCAAGGGCTTCAACCTGGGCTTCGCCGCCCAGGGCGACGTCAAGACCGGATACGAGCGGATGAAGGCGAAGG
TCAACGAAGAGCTCAAGCAGCACTTCCGGCCGGAGTTCCTCAACCGTGTCGACGACACGGTCGTCTTCCACCAGCTCACC
GAGGAAGACATCATCCAGATCGTCGACCTGATGATCGCCAAGGTGGACGAGCGGCTCAAGGACCGCGACATGGGCATCGA
GCTCAGCGCGGACGCCAAGTCGCTGCTCGCCAAGAAGGGCTACGACCCGGTCATGGGTGCCCGGCCGCTGCGCCGGACGA
TCCAGCGCGAGATCGAGGACATGCTGTCGGAGAAGATCCTCTTCGGCGAGCTGCGCCCCGGTCACATCGTGGTCGTGGAC
ACCGAGGGCGAGGGTGAGGAGAAGAAGTTCACCTTCCGCGGCGAGGAGAAGTCGGCGCTGCCCGACGTCCCGCCGATCGA
GCAGGCGGCCGGTGGTACCGGTCCGAACCTGTCGAAGGACGCGTAA
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGCCTTATCCATGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGCCAGGGCCAGCAGGCCCCGTCCGGTCACATTCCCTTC
ACGCCCCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGAGAGGCTCTTCAGCTGGGCCACAACTACATCGGCACCGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGTGAGGGCGTCGCCGCCCAGGTCCTCGTGAAGCTGGGCGCCGATCTCAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGATACCAGGGCAAGGAAGCCGCCACGGCAGGCGGCCCGGCCGAGGGCACG
CCCTCGACCTCGCTCGTCCTGGACCAGTTCGGCCGGAATCTCACCCAGGCCGCTCGTGAGTCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGTACGAAGAACAACCCCGTACTCATCGGCGAGC
CGGGCGTCGGTAAGACGGCGGTCGTCGAAGGCCTGGCGCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTGGACCTCGGTGCGCTGGTCGCCGGCTCCCGCTACCGGGGTGACTTCGAGGAGCGCCTGAAGAA
GGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACCCTGGTGGGTGCGGGTGCCG
CCGAGGGCGCGATCGACGCGGCCTCGATCCTCAAGCCGATGCTGGCGCGAGGCGAGCTGCAGACCATCGGCGCCACCACG
CTGGACGAGTACCGCAAGCACCTGGAGAAGGACGCCGCGCTCGAGCGCCGCTTCCAGCCCATCCAGGTCGCGGAGCCGTC
GCTGCCGCACACCATCGAGATCCTCAAGGGTCTGCGCGACCGCTACGAGGCCCACCATCGTGTCTCCATCACGGACGAGG
CGCTGGTCCAGGCCGCGACCCTGGCCGACCGGTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGCTCCCGGATGCGTATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGCCGGTGT
CCGCCGTGACAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGAAGGCAGCTTCGCTCCGTGACAAGGAGAAGCAGCTGC
TGGCCGCGAAGACCAAGCGCGAGAAGGAATGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAGCTGATC
GCCGAGGTCCTGGCGACCGCCACCGGCATTCCGGTCTTCAAGCTGACCGAGGAGGAGTCCTCGCGTCTGCTGCGCATGGA
GGACGAGCTCCACAAGCGCGTCATCGGGCAGAAGGACGCCATCAAGGCCCTTTCGCAGGCGATCCGCCGTACGCGAGCCG
GCCTGAAGGACCCGAAGCGCCCCGGTGGCTCGTTCATCTTCGCCGGTCCGTCCGGTGTCGGTAAGACCGAGCTCTCCAAG
ACGCTCGCCGAATTCCTCTTCGGCGACGAGGACGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACACGGT
TTCCCGTCTCTTCGGTTCGCCCCCCGGATACGTGGGTTACGAAGAGGGCGGTCAGCTCACAGAGAAGGTGCGCCGCAAGC
CGTTCTCCGTCGTCCTCTTCGACGAGGTGGAGAAGGCCCACCCCGATATCTTCAATTCCCTTCTGCAGATCCTGGAGGAC
GGTCGCCTGACCGACTCCCAGGGCCGCGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGGACCCG
GGACATCTCCAAGGGCTTCAACCTGGGCTTCGCCGCCCAGGGCGACGTCAAGACCGGATACGAGCGGATGAAGGCGAAGG
TCAACGAAGAGCTCAAGCAGCACTTCCGGCCGGAGTTCCTCAACCGTGTCGACGACACGGTCGTCTTCCACCAGCTCACC
GAGGAAGACATCATCCAGATCGTCGACCTGATGATCGCCAAGGTGGACGAGCGGCTCAAGGACCGCGACATGGGCATCGA
GCTCAGCGCGGACGCCAAGTCGCTGCTCGCCAAGAAGGGCTACGACCCGGTCATGGGTGCCCGGCCGCTGCGCCGGACGA
TCCAGCGCGAGATCGAGGACATGCTGTCGGAGAAGATCCTCTTCGGCGAGCTGCGCCCCGGTCACATCGTGGTCGTGGAC
ACCGAGGGCGAGGGTGAGGAGAAGAAGTTCACCTTCCGCGGCGAGGAGAAGTCGGCGCTGCCCGACGTCCCGCCGATCGA
GCAGGCGGCCGGTGGTACCGGTCCGAACCTGTCGAAGGACGCGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
61.347 |
95.363 |
0.585 |
| clpC | Streptococcus mutans UA159 |
44.458 |
98.692 |
0.439 |
| clpC | Streptococcus thermophilus LMD-9 |
43.333 |
99.881 |
0.433 |
| clpC | Streptococcus thermophilus LMG 18311 |
43.163 |
100 |
0.432 |
| clpC | Streptococcus pneumoniae Rx1 |
44.583 |
95.482 |
0.426 |
| clpC | Streptococcus pneumoniae D39 |
44.583 |
95.482 |
0.426 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
44.074 |
96.314 |
0.424 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.612 |
94.887 |
0.423 |
| clpE | Streptococcus mutans UA159 |
53.674 |
74.435 |
0.4 |
| clpE | Streptococcus pneumoniae TIGR4 |
51.73 |
75.624 |
0.391 |
| clpE | Streptococcus pneumoniae Rx1 |
51.572 |
75.624 |
0.39 |
| clpE | Streptococcus pneumoniae D39 |
51.572 |
75.624 |
0.39 |
| clpE | Streptococcus pneumoniae R6 |
51.572 |
75.624 |
0.39 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.258 |
73.722 |
0.385 |