NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	OHS81_RS19070	Genome accession	NZ_CP107940
Coordinates	4377154..4379784 (+)	Length	876 a.a.
NCBI ID	WP_328385940.1	Uniprot ID	-
Organism	Streptomyces sp. NBC_00400
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4372154..4384784

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHS81_RS19040 (OHS81_19045)	grpE	4372579..4373229 (+)	651	WP_311626398.1	nucleotide exchange factor GrpE	-
OHS81_RS19045 (OHS81_19050)	dnaJ	4373275..4374447 (+)	1173	WP_328385936.1	molecular chaperone DnaJ	-
OHS81_RS19050 (OHS81_19055)	-	4374449..4374901 (+)	453	WP_088798603.1	helix-turn-helix domain-containing protein	-
OHS81_RS19055 (OHS81_19060)	-	4375061..4375465 (-)	405	WP_328385937.1	hypothetical protein	-
OHS81_RS19060 (OHS81_19065)	-	4375891..4376295 (-)	405	WP_328385938.1	pyridoxamine 5'-phosphate oxidase family protein	-
OHS81_RS19065 (OHS81_19070)	-	4376325..4376906 (-)	582	WP_328385939.1	Uma2 family endonuclease	-
OHS81_RS19070 (OHS81_19075)	clpC	4377154..4379784 (+)	2631	WP_328385940.1	ATP-dependent chaperone ClpB	Regulator
OHS81_RS19075 (OHS81_19080)	-	4379951..4380487 (+)	537	WP_088798597.1	YbjN domain-containing protein	-
OHS81_RS19080 (OHS81_19085)	-	4380675..4381853 (-)	1179	WP_328385941.1	pyridoxal phosphate-dependent aminotransferase	-
OHS81_RS19085 (OHS81_19090)	-	4382053..4382340 (+)	288	WP_328385942.1	hypothetical protein	-
OHS81_RS19090 (OHS81_19095)	-	4382748..4383269 (+)	522	WP_129295538.1	DUF2617 family protein	-

Sequence

Protein

Download Length: 876 a.a. Molecular weight: 95440.09 Da Isoelectric Point: 4.8003

                                >NTDB_id=649728 OHS81_RS19070 WP_328385940.1 4377154..4379784(+) (clpC) [Streptomyces sp. NBC_00400]

MDAELTNKSREALSAANERAVTAGHADMTSAHLLLALLAGQDNENIMDLLSAVEADAAVLRNGAERQLAGLPSVQGTTVA

PPQPDRDLLSAIADATQRAKELGDAYVSTEHLLIGIAAKGGRTGELLAGQGASAKKLLAAFEASRGGQRVTNADPEGTYK

ALEKFGTDFTAAAREGKLDPVIGRDHEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLRNKRLVA

LDLGAMVAGAKYRGEFEERLKTVLAEIKSSEGQIITFIDELHTVVGAGAGGDSSMDAGNMLKPMLARGELRMVGATTLDE

YRERIEKDPALERRFQQVLVAEPTVEDTVAILRGLKGRYEAHHKVQIADSALVAAASLSDRYITSRFLPDKAIDLVDEAA

SRLRMEIDSSPVEIDELQRAVDRLKMEELALRNETDAGSLQRLEKLRKDLADKEEELRGLTARWEKEKESLNRVGALKEK

LDELRGQAERAQRDGDFDTASKLLYGEIPGVEQALEEAAAAEAEQEASKESMVKEEVGPDDIADVVGAWTGIPAGRLLEG

ETQKLLRMEEELGKRLIGQTEAVRSVSDAVRRTRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDM

SEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHHDVFDILLQVLDDGRLTDGQGRTVDFRNTIL

ILTSNLGSAFLMDPLLKEEQKKEKVLETVRAAFRPEFLNRLDDVVVFHPLGTDQLQRIARIQLDHLQRRLGDRRLTLDVT

DRALTWLAWLGQEPVTDAPAPDLSYGARPLRRLVQTAIGDPLARAILAGEVLDGDTVRVDVDGDQLSVEPAGRAVA

Nucleotide

Download Length: 2631 bp

                                >NTDB_id=649728 OHS81_RS19070 WP_328385940.1 4377154..4379784(+) (clpC) [Streptomyces sp. NBC_00400]

GTGGACGCCGAGCTGACCAACAAGAGCCGGGAGGCGCTGAGCGCCGCCAATGAGCGGGCGGTCACCGCCGGGCATGCGGA

CATGACGTCCGCGCATCTCCTGCTCGCGCTGCTGGCCGGGCAGGACAACGAGAACATCATGGACCTGCTGTCCGCCGTCG

AGGCGGACGCCGCCGTGCTGCGCAACGGCGCCGAGCGGCAGCTCGCCGGGCTGCCGAGCGTGCAGGGCACGACGGTCGCG

CCGCCGCAGCCGGACCGCGATCTGCTCTCCGCCATCGCCGACGCCACCCAGCGCGCCAAGGAGCTCGGTGACGCCTATGT

CTCCACCGAGCACCTGCTCATCGGGATCGCCGCCAAGGGCGGGCGCACCGGTGAGCTGCTGGCCGGCCAGGGCGCGAGCG

CCAAGAAGCTGCTGGCCGCGTTCGAGGCGAGCCGGGGCGGCCAGCGGGTGACCAACGCCGACCCGGAGGGCACGTACAAG

GCGCTGGAGAAGTTCGGTACGGACTTCACGGCGGCCGCCCGCGAGGGCAAGCTCGACCCGGTCATCGGCCGGGACCACGA

GATCCGGCGCGTGGTGCAGGTGCTCTCCCGCCGTACGAAGAACAACCCCGTGCTGATCGGTGAGCCGGGCGTCGGCAAGA

CCGCCGTCGTCGAGGGCCTGGCGCAGCGGATCGTCAAGGGCGATGTGCCCGAGTCGCTGCGCAACAAGCGGCTGGTCGCG

CTCGACCTGGGGGCGATGGTCGCGGGCGCCAAGTACCGCGGTGAGTTCGAGGAGCGGCTGAAGACCGTCCTGGCGGAGAT

CAAGTCCAGCGAGGGCCAGATCATCACCTTCATCGACGAGCTGCACACCGTCGTGGGCGCGGGCGCCGGCGGCGACTCCT

CGATGGACGCCGGCAACATGCTCAAGCCGATGCTGGCCCGCGGCGAGCTGCGGATGGTCGGCGCGACGACGCTGGACGAG

TACCGCGAGCGGATCGAGAAGGACCCGGCGCTGGAGCGGCGCTTCCAGCAGGTGCTGGTCGCCGAGCCGACGGTCGAGGA

CACGGTGGCGATCCTGCGCGGGCTCAAGGGCCGCTACGAGGCGCACCACAAGGTGCAGATCGCGGACTCCGCCCTGGTCG

CGGCCGCCTCCCTCTCCGACCGCTACATCACCTCCCGCTTCCTGCCCGACAAGGCCATCGACCTGGTCGACGAGGCCGCC

TCCCGGCTCCGTATGGAGATCGACTCCTCCCCGGTGGAGATCGACGAGCTCCAGCGCGCCGTGGACCGTCTCAAGATGGA

GGAGCTGGCGCTGCGCAACGAGACCGACGCCGGCTCCCTCCAGCGGCTGGAGAAGCTGCGCAAGGACCTCGCCGACAAGG

AGGAGGAGCTGCGCGGTCTGACCGCCCGCTGGGAGAAGGAGAAGGAAAGCCTCAACCGGGTCGGTGCGCTCAAGGAAAAG

CTCGACGAGCTGCGCGGCCAGGCCGAGCGCGCCCAGCGCGACGGCGACTTCGACACCGCTTCCAAGCTGCTCTACGGCGA

GATCCCGGGCGTCGAGCAGGCGCTGGAGGAGGCGGCCGCTGCCGAGGCCGAGCAGGAGGCGTCCAAGGAGTCCATGGTCA

AGGAGGAGGTCGGTCCCGACGACATCGCGGATGTGGTCGGCGCCTGGACCGGCATCCCGGCCGGCCGGCTGCTGGAGGGC

GAGACCCAGAAGCTCCTGCGCATGGAGGAAGAGCTCGGCAAGCGCCTGATCGGCCAGACCGAGGCCGTACGGTCGGTCTC

CGACGCCGTACGCCGCACCCGCGCCGGCATCGCCGACCCGGACCGCCCCACCGGCTCCTTCCTCTTCCTCGGCCCGACCG

GTGTCGGCAAGACCGAGCTGGCCAAGGCGCTCGCGGACTTCCTCTTCGACGACGAGCGGGCGATGGTCCGGATCGACATG

TCGGAGTACGGCGAGAAGCACAGCGTCGCGCGGCTGGTCGGCGCGCCGCCCGGATACGTCGGCTACGAGGAGGGCGGCCA

GCTCACCGAGGCGGTCCGCCGCCGCCCGTACTCCGTCGTCCTGCTGGACGAGGTCGAGAAGGCGCACCACGACGTCTTCG

ACATCCTGCTCCAGGTCCTCGACGACGGCCGGCTCACCGACGGCCAGGGCCGCACGGTCGACTTCCGCAACACCATCCTC

ATCCTGACCTCCAACCTCGGCTCCGCGTTCCTGATGGACCCGCTGCTCAAGGAGGAGCAGAAGAAGGAGAAGGTGCTGGA

GACGGTCCGCGCCGCCTTCCGCCCCGAATTCCTCAACCGGCTCGACGACGTGGTGGTCTTCCACCCGCTCGGCACCGACC

AGCTCCAGCGGATCGCCCGGATCCAGCTCGACCACCTGCAGCGCCGCCTCGGCGACCGCCGTCTGACCCTGGACGTCACC

GACCGCGCCCTGACCTGGCTCGCCTGGCTCGGCCAGGAGCCGGTGACCGACGCTCCCGCGCCGGACCTGTCCTACGGTGC

CCGGCCGCTGCGCCGGCTGGTCCAGACGGCCATCGGCGACCCGCTCGCCCGCGCCATCCTGGCGGGCGAGGTGCTGGACG

GGGACACCGTGCGGGTGGATGTGGACGGTGACCAGCTGTCGGTGGAGCCGGCCGGGCGGGCCGTGGCCTGA