Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   L2Z36_RS17465 Genome accession   NZ_CP091340
Coordinates   3659396..3660550 (+) Length   384 a.a.
NCBI ID   WP_000755285.1    Uniprot ID   A0A0J1DES9
Organism   Acinetobacter baumannii strain AB227-VUB     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3654396..3665550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2Z36_RS17440 (L2Z36_17440) - 3654547..3655761 (+) 1215 WP_001177951.1 oxygenase MpaB family protein -
  L2Z36_RS17445 (L2Z36_17445) - 3655831..3656037 (-) 207 WP_000182542.1 hypothetical protein -
  L2Z36_RS17450 (L2Z36_17450) - 3656091..3658205 (-) 2115 WP_001120675.1 TonB-dependent copper receptor -
  L2Z36_RS17455 (L2Z36_17455) - 3658278..3658706 (-) 429 WP_000231981.1 DUF2946 family protein -
  L2Z36_RS17460 (L2Z36_17460) def 3658743..3659273 (-) 531 WP_001196539.1 peptide deformylase -
  L2Z36_RS17465 (L2Z36_17465) tsaP 3659396..3660550 (+) 1155 WP_000755285.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  L2Z36_RS17470 (L2Z36_17470) dprA 3660571..3661701 (+) 1131 WP_001991425.1 DNA-processing protein DprA Machinery gene
  L2Z36_RS17475 (L2Z36_17475) - 3661752..3662321 (+) 570 WP_000633612.1 Sua5/YciO/YrdC/YwlC family protein -
  L2Z36_RS17480 (L2Z36_17480) - 3662713..3663633 (-) 921 WP_001994180.1 DMT family transporter -
  L2Z36_RS17485 (L2Z36_17485) - 3663739..3664389 (-) 651 WP_012300783.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42299.18 Da        Isoelectric Point: 8.5790

>NTDB_id=649581 L2Z36_RS17465 WP_000755285.1 3659396..3660550(+) (tsaP) [Acinetobacter baumannii strain AB227-VUB]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLENIKQWLE
NSTILPADSITNTPYVVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGVELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=649581 L2Z36_RS17465 WP_000755285.1 3659396..3660550(+) (tsaP) [Acinetobacter baumannii strain AB227-VUB]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC
CCAATGTATATGTTGTGAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTAGGTATTATTCGCCGCTACACTGGGCAAACCACAAACC
TGCAACCTCAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCTGTTATTCCACTTGAAAATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATGTGGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACCATTTACGCACGAGGACAAGGCTTAATTAATGGGCAACGTTATGCCGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGGTTGAGCTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTACCAACACTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGTTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTGATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0J1DES9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

98.698

100

0.987