Detailed information NTG0649490

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OG389_RS26985
• Genome accession: NZ_CP107924
• Coordinates: 5851594..5852817 (+)
• Length: 407 a.a.
• NCBI ID: WP_328301026.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00435
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5846594..5857817

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG389_RS26965 (OG389_26975)	-	5847352..5848785 (+)	1434	WP_328301022.1	sugar porter family MFS transporter	-
OG389_RS26970 (OG389_26980)	-	5848838..5849824 (-)	987	WP_328301023.1	LLM class flavin-dependent oxidoreductase	-
OG389_RS26975 (OG389_26985)	-	5849888..5851330 (-)	1443	WP_328301024.1	cytosine permease	-
OG389_RS26980 (OG389_26990)	-	5851420..5851548 (+)	129	WP_328301025.1	hypothetical protein	-
OG389_RS26985 (OG389_26995)	pilA	5851594..5852817 (+)	1224	WP_328301026.1	signal recognition particle-docking protein FtsY	Machinery gene
OG389_RS26990 (OG389_27000)	-	5852913..5853584 (-)	672	WP_328301027.1	bifunctional DNA primase/polymerase	-
OG389_RS26995 (OG389_27005)	-	5853965..5855491 (+)	1527	WP_328301028.1	hypothetical protein	-
OG389_RS27000 (OG389_27010)	-	5855828..5857174 (+)	1347	WP_328301029.1	ammonium transporter	-
OG389_RS27005 (OG389_27015)	-	5857171..5857509 (+)	339	WP_112451060.1	P-II family nitrogen regulator	-

Sequence

Protein

• Length: 407 a.a.
• Molecular weight: 42655.86 Da
• Isoelectric Point: 4.4520

>NTDB_id=649490 OG389_RS26985 WP_328301026.1 5851594..5852817(+) (pilA) [Streptomyces sp. NBC_00435]
MEILILAVVIALVAVGAISGLVVSSRKKKQLPPTAPSSTPTITAPPAEPQVGEDAAPTAQEPRRTIEEVALPDAESALES
PVAVEDPVVEAPPAPEIEVPEPTAGRLVRLRARLARSQNTLGKGLLTLLSREHLDEDTWEEIEETLLIADVGVAPTQELV
DRLRERVKVLGTRTPADLRALLKEELVALLGTDFDRAVKTESGVDTPAVIMVVGVNGTGKTTTTGKLARVLVADGRSVVL
GAADTFRAAAADQLQTWGDRVGARTVRGPEGGDPASIAYDAVKEGIKEGADVVLIDTAGRLHTKTGLMDELGKVKRVVEK
HGPLDEILLVLDATTGQNGLTQARVFAEVVDITGIVLTKLDGTAKGGIVIAVQRELGVPVKLVGLGEGADDLAPFEPEAF
VDALIGD

Nucleotide

• Length: 1224 bp

>NTDB_id=649490 OG389_RS26985 WP_328301026.1 5851594..5852817(+) (pilA) [Streptomyces sp. NBC_00435]
ATGGAAATCCTCATCCTTGCCGTAGTCATCGCCCTGGTCGCGGTCGGTGCGATCAGCGGGCTCGTGGTCAGCAGCCGCAA
GAAGAAGCAGCTGCCGCCCACGGCGCCGTCGAGCACGCCGACCATCACTGCCCCGCCCGCCGAGCCGCAGGTGGGGGAGG
ACGCCGCACCGACGGCACAAGAGCCGCGCCGCACGATCGAGGAGGTCGCCCTTCCCGACGCGGAGAGCGCACTCGAATCC
CCCGTCGCCGTCGAGGACCCGGTCGTGGAGGCTCCGCCGGCCCCCGAGATCGAGGTTCCCGAGCCCACCGCCGGCCGCCT
GGTCCGGCTGCGCGCCCGCCTCGCCCGGTCGCAGAACACGCTCGGCAAGGGGCTGCTCACGCTGCTCTCCCGCGAGCACC
TCGACGAGGACACCTGGGAGGAGATCGAGGAGACCCTCCTCATCGCCGACGTCGGTGTCGCGCCGACCCAGGAACTGGTG
GACCGCCTGCGCGAGCGCGTCAAGGTGCTCGGCACCCGCACCCCCGCCGATCTGCGCGCCCTGCTGAAGGAGGAGCTGGT
CGCGCTCCTCGGCACCGACTTCGACCGCGCCGTGAAGACCGAGAGCGGCGTGGACACCCCCGCCGTGATCATGGTCGTCG
GTGTGAACGGCACCGGCAAGACCACCACCACCGGCAAGCTCGCCCGCGTGCTCGTCGCCGACGGGCGCAGCGTCGTGCTC
GGCGCGGCCGACACCTTCCGCGCCGCCGCCGCCGACCAGCTCCAGACCTGGGGCGACCGGGTCGGCGCGCGCACCGTGCG
CGGCCCTGAGGGCGGTGACCCGGCCTCGATCGCCTACGACGCGGTCAAGGAGGGCATCAAGGAGGGCGCCGACGTGGTGC
TCATCGACACCGCCGGCCGGCTGCACACCAAGACCGGTCTGATGGACGAGCTCGGCAAGGTCAAGCGCGTCGTGGAGAAG
CACGGACCGCTCGACGAGATCCTGCTGGTCCTGGACGCCACCACCGGCCAGAACGGTCTGACCCAGGCCCGCGTCTTCGC
GGAGGTCGTGGACATCACCGGCATCGTGCTGACCAAGCTCGACGGCACCGCCAAGGGCGGCATCGTCATCGCCGTCCAGC
GCGAGCTCGGCGTCCCGGTCAAGCTCGTCGGCCTCGGTGAGGGCGCGGACGACCTGGCGCCCTTCGAGCCGGAGGCCTTC
GTCGACGCCCTGATCGGCGACTGA

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (121-186)

• SRP54-type protein, GTPase domain (SRP54) (207-405)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	38.889	100	0.396