Detailed information NTG0064949

Bioinformatically predicted

Overview

• Name: amiC
• Type: Regulator
• Locus tag: H020_RS0109400
• Genome accession: NZ_AKVY01000001
• Coordinates: 1795973..1797469 (-)
• Length: 498 a.a.
• NCBI ID: WP_000759901.1
• Uniprot ID: P0A4M7
• Organism: Streptococcus pneumoniae TIGR4
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1790973..1802469

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H020_RS13080	-	1791633..1792959 (+)	1327	Protein_1782	ISL3 family transposase	-
H020_RS0109385	amiF	1793034..1793960 (-)	927	WP_001291293.1	ATP-binding cassette domain-containing protein	Regulator
H020_RS0109390	amiE	1793971..1795038 (-)	1068	WP_000159554.1	ABC transporter ATP-binding protein	Regulator
H020_RS0109395	amiD	1795047..1795973 (-)	927	WP_000103700.1	oligopeptide ABC transporter permease OppC	Regulator
H020_RS0109400	amiC	1795973..1797469 (-)	1497	WP_000759901.1	ABC transporter permease	Regulator
H020_RS0109405	amiA3	1797536..1799515 (-)	1980	WP_000742235.1	peptide ABC transporter substrate-binding protein	Regulator
H020_RS0109410	-	1800200..1801393 (-)	1194	WP_000835623.1	O-antigen ligase family protein	-

Sequence

Protein

• Length: 498 a.a.
• Molecular weight: 55623.17 Da
• Isoelectric Point: 9.4436

>NTDB_id=64949 H020_RS0109400 WP_000759901.1 1795973..1797469(-) (amiC) [Streptococcus pneumoniae TIGR4]
MKKYIFMRVLRSLVSIFLVTTLTYTIIYTLVPRKLIFKQDPNYNKIATTADKRDNYENTVFERMGYIEYYDTKELQEKAS
SMDSSVTVEANATNKAIYEKYINQLGHGWTLGEFTESGQFYATREIPIFERVFHFYANLIDIDHTNKIQDPENPDLKRYL
RFENDPAIGWSLVGSGTKHKYLLYFNSQFPFVHQNFVNLNLGDSYPTYANTPVLQVITQGQGQTKTAQVQFPTGKKTSSV
NIYSRTYKSPSQADSREVASYGKDDPYTATESNYQYPSMIVSSAITGLIGLVLAYALAVPLGSAMARFKNTWIDSLSTGA
LTFLLALPTIALVYIVRLIGSSIALPDSFPILGAGDWRSYVLPAVILGLLGAPGTAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSGIPAAIIGVIGGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCISIFSRLLGD
IWMTIIDPRIKLTEKGGK

Nucleotide

• Length: 1497 bp

>NTDB_id=64949 H020_RS0109400 WP_000759901.1 1795973..1797469(-) (amiC) [Streptococcus pneumoniae TIGR4]
ATGAAAAAATATATTTTTATGCGTGTTTTGCGGTCATTGGTTTCGATTTTCTTAGTAACGACTTTGACCTACACGATTAT
CTATACCTTGGTTCCTCGAAAATTGATTTTCAAGCAGGATCCTAACTATAATAAAATTGCGACAACGGCTGATAAACGTG
ATAACTATGAAAATACTGTGTTTGAGCGTATGGGCTACATTGAGTATTACGATACTAAAGAGTTGCAAGAAAAGGCAAGT
AGCATGGATTCTTCTGTAACAGTAGAAGCAAATGCGACCAATAAAGCTATTTATGAAAAGTACATCAATCAATTAGGTCA
TGGTTGGACTTTGGGAGAATTTACTGAAAGTGGTCAATTCTATGCTACTCGTGAAATTCCAATTTTTGAACGTGTTTTTC
ACTTCTATGCTAACTTGATTGACATTGACCATACAAATAAAATCCAAGACCCTGAAAATCCAGACTTGAAACGCTACCTT
CGTTTTGAAAATGATCCAGCTATCGGATGGTCATTGGTCGGTTCAGGAACTAAACATAAATATCTCTTGTACTTTAACAG
TCAGTTCCCATTTGTTCATCAAAACTTTGTGAACTTGAATTTAGGTGACTCTTACCCAACCTATGCTAATACACCAGTTC
TTCAGGTTATTACTCAAGGTCAAGGACAAACCAAAACTGCCCAAGTTCAGTTCCCAACAGGTAAGAAAACGTCTTCTGTA
AATATTTACTCAAGAACCTACAAGTCACCTAGTCAGGCTGACTCTCGTGAAGTAGCTAGCTATGGGAAAGATGATCCTTA
TACAGCGACTGAAAGTAATTACCAATATCCATCTATGATTGTCAGCTCTGCTATTACTGGTTTGATTGGTTTGGTTCTTG
CCTATGCTCTTGCCGTGCCACTTGGTTCAGCCATGGCTCGTTTCAAGAACACTTGGATTGATAGCCTCTCAACAGGGGCT
TTGACCTTCTTGCTTGCTCTTCCAACGATTGCCTTGGTTTACATCGTTCGATTGATTGGATCATCTATTGCCCTTCCAGA
TTCATTCCCTATCTTGGGAGCTGGAGATTGGCGTTCTTACGTTTTACCAGCAGTCATCCTTGGTTTGTTGGGTGCTCCTG
GTACAGCCATTTGGATTCGTCGTTACATGATTGACTTGCAATCTCAAGACTTTGTTCGTTTCGCTCGTGCAAAAGGTTTG
TCTGAAAAAGAAATTTCAAACAAACACATCTTTAAAAATGCCATGGTTCCGCTGGTTTCAGGAATTCCTGCTGCCATTAT
TGGGGTTATCGGTGGTGCAACCCTTACTGAAACAGTCTTCGCCTTCCCAGGTATGGGTAAAATGTTGATTGACTCTGTAA
AAGCATCTAATAACTCTATGGTCGTTGGTCTTGTCTTCATCTTTACATGTATTTCTATCTTCTCACGTCTTTTGGGAGAT
ATTTGGATGACTATTATTGACCCACGTATTAAATTGACTGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (298-491)

3D structure

• AlphaFold DB: P0A4M7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiC	Streptococcus salivarius strain HSISS4	77.309	100	0.773
amiC	Streptococcus thermophilus LMG 18311	77.108	100	0.771
amiC	Streptococcus thermophilus LMD-9	76.707	100	0.767