Detailed information NTG0649446

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z39_RS02895
• Genome accession: NZ_CP091338
• Coordinates: 589021..589722 (+)
• Length: 233 a.a.
• NCBI ID: WP_004747380.1
• Uniprot ID: A0A9E9PDK8
• Organism: Acinetobacter baumannii strain AB231-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 584021..594722

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z39_RS02860 (L2Z39_02860)	kdsB	584544..585305 (+)	762	WP_196085333.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2Z39_RS02865 (L2Z39_02865)	-	585317..586297 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
L2Z39_RS02870 (L2Z39_02870)	-	586309..586650 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
L2Z39_RS02875 (L2Z39_02875)	-	586668..587441 (+)	774	WP_215763529.1	TatD family hydrolase	-
L2Z39_RS02880 (L2Z39_02880)	-	587479..588087 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z39_RS02885 (L2Z39_02885)	-	588097..588651 (+)	555	WP_005128793.1	type II secretion system protein	-
L2Z39_RS02890 (L2Z39_02890)	xcpV	588641..589021 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z39_RS02895 (L2Z39_02895)	xcpW	589021..589722 (+)	702	WP_004747380.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z39_RS02900 (L2Z39_02900)	gspK	589722..590681 (+)	960	WP_005128789.1	type II secretion system minor pseudopilin GspK	-
L2Z39_RS02905 (L2Z39_02905)	-	590911..591507 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
L2Z39_RS02910 (L2Z39_02910)	ung	591558..592271 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
L2Z39_RS02915 (L2Z39_02915)	-	592268..593392 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z39_RS02920 (L2Z39_02920)	tadA	593399..593902 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
L2Z39_RS02925 (L2Z39_02925)	-	593972..594415 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26629.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=649446 L2Z39_RS02895 WP_004747380.1 589021..589722(+) (xcpW) [Acinetobacter baumannii strain AB231-VUB]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=649446 L2Z39_RS02895 WP_004747380.1 589021..589722(+) (xcpW) [Acinetobacter baumannii strain AB231-VUB]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996