Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OHR86_RS25120 Genome accession   NZ_CP107919
Coordinates   5534859..5535653 (-) Length   264 a.a.
NCBI ID   WP_026171816.1    Uniprot ID   A0ABY6PP80
Organism   Streptomyces sp. NBC_00441     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5529859..5540653
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHR86_RS25105 (OHR86_25130) - 5530241..5530831 (+) 591 WP_328902752.1 GNAT family N-acetyltransferase -
  OHR86_RS25110 (OHR86_25135) - 5530892..5532727 (+) 1836 WP_328902753.1 IucA/IucC family siderophore biosynthesis protein -
  OHR86_RS25115 (OHR86_25140) - 5532778..5534748 (+) 1971 WP_328902754.1 ATP-dependent DNA helicase -
  OHR86_RS25120 (OHR86_25145) dinR/lexA 5534859..5535653 (-) 795 WP_026171816.1 transcriptional repressor LexA Regulator
  OHR86_RS25125 (OHR86_25150) nrdR 5536170..5536682 (+) 513 WP_328902755.1 transcriptional regulator NrdR -
  OHR86_RS25130 (OHR86_25155) - 5536847..5539750 (+) 2904 WP_328902756.1 vitamin B12-dependent ribonucleotide reductase -
  OHR86_RS25135 (OHR86_25160) - 5539814..5540350 (-) 537 WP_328902757.1 TerD family protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 28592.36 Da        Isoelectric Point: 6.9854

>NTDB_id=649345 OHR86_RS25120 WP_026171816.1 5534859..5535653(-) (dinR/lexA) [Streptomyces sp. NBC_00441]
MTTTADSAIITAQDRSQSRLEPVHAMNDSVTNTEGPEPGRPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYP
PSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQPTDTTGKPAASYVPLVGRIAAGGPILAE
ESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHN
AAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=649345 OHR86_RS25120 WP_026171816.1 5534859..5535653(-) (dinR/lexA) [Streptomyces sp. NBC_00441]
GTGACCACCACCGCAGACAGTGCCATCATCACTGCCCAGGACCGCTCCCAGAGCCGACTCGAGCCGGTGCATGCCATGAA
TGACTCAGTCACGAACACGGAGGGCCCGGAGCCCGGGCGCCCAGCGCGCTCGCTTCCCGGACGACCTCCCGGAATCCGGG
CGGACAGCTCGGGGCTCACAGACCGGCAGCGGCGGGTGATCGAGGTCATCCGGGATTCCGTGCAGCGGCGTGGCTATCCG
CCGTCGATGCGGGAGATCGGTCAGGCGGTGGGCCTCTCCAGCACTTCCTCCGTCGCCCATCAGCTGATGGCTCTGGAGCG
CAAGGGCTTCCTGCGTCGCGACCCCCACCGCCCCCGGGCGTACGAGGTACGCGGCTCGGACCAGCCGAGCACGCAGCCGA
CGGACACCACGGGCAAGCCCGCCGCCTCGTACGTACCGCTGGTGGGCCGGATCGCCGCCGGTGGGCCGATCCTCGCCGAG
GAGTCCGTCGAGGACGTCTTCCCGCTCCCCCGCCAGCTGGTGGGGGACGGCGAGCTCTTCGTCCTCAAGGTCGTCGGTGA
CTCGATGATCGAGGCGGCGATCTGTGACGGCGACTGGGTCACCGTGCGCCGCCAGCCCGTCGCGGAGAACGGCGACATCG
TGGCCGCCATGCTGGACGGCGAGGCCACGGTGAAGCGCTTCAAGCGCGAGGACGGCCATGTCTGGCTGCTTCCGCACAAC
GCCGCCTACCAGCCGATCCCCGGCGACGAGGCGACGATCCTCGGCAAGGTCGTCGCGGTGCTGCGCAGGGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(146-258)

LexA DNA binding domain (LexA_DNA_bind)

(57-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80.303

0.371