Detailed information NTG0064925

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7R02_RS22895
• Genome accession: NZ_AP021963
• Coordinates: 4755326..4756351 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain WP3-W18-CRE-03
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4750326..4761351

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R02_RS22875 (WP3W18C03_44340)	metJ	4751511..4751828 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
H7R02_RS22880 (WP3W18C03_44350)	yiiX	4751888..4752496 (+)	609	WP_000702298.1	YiiX family permuted papain-like enzyme	-
H7R02_RS22885 (WP3W18C03_44360)	rpmE	4752557..4752769 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7R02_RS22890 (WP3W18C03_44370)	priA	4752972..4755170 (+)	2199	WP_001540348.1	primosomal protein N'	Machinery gene
H7R02_RS22895 (WP3W18C03_44380)	cytR	4755326..4756351 (+)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
H7R02_RS22900 (WP3W18C03_44390)	ftsN	4756443..4757402 (+)	960	WP_000068847.1	cell division protein FtsN	-
H7R02_RS22905 (WP3W18C03_44400)	hslV	4757495..4758025 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7R02_RS22910 (WP3W18C03_44410)	hslU	4758035..4759366 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
H7R02_RS22915 (WP3W18C03_44420)	menA	4759433..4760359 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7R02_RS22920 (WP3W18C03_44430)	rraA	4760452..4760937 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7R02_RS22925 (WP3W18C03_44440)	zapB	4761022..4761267 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=64925 H7R02_RS22895 WP_000644911.1 4755326..4756351(+) (cytR) [Escherichia coli strain WP3-W18-CRE-03]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=64925 H7R02_RS22895 WP_000644911.1 4755326..4756351(+) (cytR) [Escherichia coli strain WP3-W18-CRE-03]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625