Detailed information NTG0648886

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: L3C11_RS05700
• Genome accession: NZ_CP091288
• Coordinates: 1124418..1125566 (-)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JJ47
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1119418..1130566

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L3C11_RS05670 (L3C11_05670)	-	1119554..1120312 (-)	759	WP_007609404.1	ABC transporter ATP-binding protein	-
L3C11_RS05675 (L3C11_05675)	-	1120306..1121253 (-)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
L3C11_RS05680 (L3C11_05680)	ceuB	1121243..1122196 (-)	954	WP_032872883.1	ABC transporter permease	Machinery gene
L3C11_RS05685 (L3C11_05685)	-	1122610..1123974 (+)	1365	WP_007609394.1	aspartate kinase	-
L3C11_RS05690 (L3C11_05690)	-	1124054..1124164 (+)	111	WP_369878517.1	YjcZ family sporulation protein	-
L3C11_RS05695 (L3C11_05695)	phrC	1124315..1124434 (-)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
L3C11_RS05700 (L3C11_05700)	rapC	1124418..1125566 (-)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
L3C11_RS05705 (L3C11_05705)	-	1125719..1127152 (-)	1434	WP_161503657.1	sensor histidine kinase	-
L3C11_RS05710 (L3C11_05710)	-	1127139..1127822 (-)	684	WP_032872879.1	response regulator transcription factor	-
L3C11_RS05715 (L3C11_05715)	-	1128035..1129465 (+)	1431	WP_032872876.1	ABC transporter permease	-
L3C11_RS05720 (L3C11_05720)	-	1129480..1130163 (+)	684	WP_032872874.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=648886 L3C11_RS05700 WP_007410270.1 1124418..1125566(-) (rapC) [Bacillus velezensis strain JJ47]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=648886 L3C11_RS05700 WP_007410270.1 1124418..1125566(-) (rapC) [Bacillus velezensis strain JJ47]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568