Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG828_RS22065 Genome accession   NZ_CP107905
Coordinates   4879608..4880732 (+) Length   374 a.a.
NCBI ID   WP_210578002.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00457     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4874608..4885732
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG828_RS22050 (OG828_22030) - 4875283..4876140 (+) 858 WP_328502088.1 hypothetical protein -
  OG828_RS22055 (OG828_22035) - 4876186..4877919 (-) 1734 WP_328502089.1 hypothetical protein -
  OG828_RS22060 (OG828_22040) radA/sms 4878116..4879525 (+) 1410 WP_328359510.1 DNA repair protein RadA Machinery gene
  OG828_RS22065 (OG828_22045) disA 4879608..4880732 (+) 1125 WP_210578002.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG828_RS22070 (OG828_22050) - 4880840..4881682 (-) 843 WP_328439243.1 hypothetical protein -
  OG828_RS22075 (OG828_22055) - 4881887..4882822 (+) 936 WP_328359517.1 A/G-specific adenine glycosylase -
  OG828_RS22080 (OG828_22060) - 4883067..4883624 (+) 558 WP_210577999.1 SigE family RNA polymerase sigma factor -
  OG828_RS22085 (OG828_22065) - 4883726..4884286 (+) 561 WP_328442375.1 hypothetical protein -
  OG828_RS22090 (OG828_22070) cseB 4884417..4885121 (+) 705 WP_328359521.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40184.96 Da        Isoelectric Point: 5.1026

>NTDB_id=648595 OG828_RS22065 WP_210578002.1 4879608..4880732(+) (disA) [Streptomyces sp. NBC_00457]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTAMRDGLERVLRGNTGGLIVLGFDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLNSDLSKILRAGVQFVPDARIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALSELDALHHAELLELPTVARALGYTGSPEALDTAVSPRGFRLLAKVPRLPGA
IIDRLVDHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=648595 OG828_RS22065 WP_210578002.1 4879608..4880732(+) (disA) [Streptomyces sp. NBC_00457]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGTGGGAGTTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCCATGCGCGACGGCCTTGAGCGGGTGCTCCGCGGCAATACCGGCGGTCTCATCGTGC
TCGGCTTCGACAAGACCGTCGAGGCGATGTGCACGGGCGGATTCGTGCTGGACGTCGAGTTCACGGCCACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCAACTCCGACCTGTCGAAGATCCTGCGAGCGGGCGTGCAGTTCGTCCC
CGACGCGAGGATCCCGACCGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGGTCGGTTTCCCCG
TCGTCTCCGTCTCCCAGTCCATGCGGCTGATCGCGCTGTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCGCTGGCGACCCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCCGTCGCCCAGCGCCTGGAGATGGTGCGCCGTATCG
CCACCGAAATCGCCGAGTATGTGGTCGAACTGGGCACCGACGGACGGCTCCTGGCCCTCCAGCTAGACGAGCTGATCGCC
GGCGTGGAGCCCGAGCGCGAGCTGGTCGTCCGGGACTACGTCCCCGAACCCACCGCGAAACGCTCCCGCACAGTCGAGGA
AGCCCTCTCCGAACTGGACGCCCTCCACCACGCCGAACTCCTCGAACTCCCCACGGTGGCACGGGCATTGGGCTACACCG
GATCCCCCGAGGCCCTCGACACCGCAGTATCACCCCGCGGCTTCCGCCTCCTGGCAAAGGTCCCCCGCCTCCCGGGGGCC
ATCATCGACCGCCTCGTAGACCACTTCGGCGGCCTGCAGAAACTCCTCGCCGCGAGCGTCGACGACCTGCAGACGGTGGA
CGGAGTGGGCGAGGCAAGGGCCCGAAGCGTACGGGAGGGCCTGTCGAGGCTGGCGGAGAGCTCGATCCTGGAACGGTACG
TCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43