Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   OHN74_RS00525 Genome accession   NZ_CP107903
Coordinates   132175..132852 (+) Length   225 a.a.
NCBI ID   WP_327692481.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00459     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 127175..137852
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHN74_RS00510 (OHN74_00515) - 127833..128315 (+) 483 WP_327692478.1 MarR family transcriptional regulator -
  OHN74_RS00515 (OHN74_00520) - 128682..130877 (+) 2196 WP_327692479.1 MMPL family transporter -
  OHN74_RS00520 (OHN74_00525) - 130968..132161 (+) 1194 WP_327692480.1 sensor histidine kinase -
  OHN74_RS00525 (OHN74_00530) vraR 132175..132852 (+) 678 WP_327692481.1 response regulator transcription factor Regulator
  OHN74_RS00530 (OHN74_00535) - 132970..133629 (-) 660 WP_327692482.1 response regulator transcription factor -
  OHN74_RS00535 (OHN74_00540) - 133626..134822 (-) 1197 WP_327692483.1 histidine kinase -
  OHN74_RS00540 (OHN74_00545) - 134985..135704 (+) 720 WP_327692484.1 ABC transporter ATP-binding protein -
  OHN74_RS00545 (OHN74_00550) - 135701..137710 (+) 2010 WP_327692485.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 225 a.a.        Molecular weight: 24219.81 Da        Isoelectric Point: 4.6231

>NTDB_id=648461 OHN74_RS00525 WP_327692481.1 132175..132852(+) (vraR) [Streptomyces sp. NBC_00459]
MTIRVLLADDQALLRGTFKLLIDAQPDMEVVAEASNGREAVQSARSERADLVVMDIRMPEVDGIEATRLIGQDEDLAGLK
VLVLTTFEEDELVIDALRAGASGFLGKGVEPAQLLDAIRLITAGESLLSPAATKGLISRVLSQPSPGDLVDRERLASLTP
REREVLTLVAAGLSNDEIAERIFVTPVTVKTHANRAMAKLGARDRAQLVVIAYESGLVRTGERRS

Nucleotide


Download         Length: 678 bp        

>NTDB_id=648461 OHN74_RS00525 WP_327692481.1 132175..132852(+) (vraR) [Streptomyces sp. NBC_00459]
ATGACCATTCGCGTCCTGCTAGCCGACGACCAGGCCCTGCTCCGCGGCACCTTCAAACTGCTCATCGACGCCCAGCCGGA
CATGGAGGTCGTCGCGGAGGCATCCAACGGCCGTGAGGCGGTTCAGTCGGCACGGTCCGAGCGCGCCGACCTCGTGGTGA
TGGACATCCGGATGCCCGAGGTCGACGGGATCGAGGCCACGCGGCTGATCGGCCAGGACGAGGACCTGGCCGGGCTCAAG
GTCCTCGTCCTGACCACCTTCGAGGAGGACGAGCTCGTCATCGACGCACTCCGAGCCGGGGCCAGCGGTTTCCTCGGCAA
GGGCGTCGAACCAGCACAGCTCCTCGACGCGATCCGTCTCATCACCGCGGGAGAGTCCCTGCTCTCCCCCGCCGCCACCA
AGGGCCTGATCTCCCGAGTCCTGTCCCAGCCTTCCCCGGGAGACCTCGTCGACCGAGAACGTCTGGCCTCGCTGACACCC
CGGGAACGCGAGGTGCTGACGCTGGTGGCCGCGGGCCTGTCCAACGACGAGATCGCCGAACGCATCTTCGTCACCCCGGT
CACCGTCAAGACCCACGCCAACCGGGCCATGGCCAAACTCGGCGCCCGCGACCGCGCCCAACTCGTCGTCATCGCCTACG
AAAGCGGCCTGGTCCGCACCGGGGAGCGGCGGAGCTGA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, luxR family (GerE)

(157-212)

Response regulator receiver domain (Response_reg)

(5-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

37.443

97.333

0.364