Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG912_RS06075 Genome accession   NZ_CP107899
Coordinates   1418023..1418817 (+) Length   264 a.a.
NCBI ID   WP_219573501.1    Uniprot ID   A0ABY9IM67
Organism   Streptomyces sp. NBC_00464     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1413023..1423817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG912_RS06060 (OG912_06060) - 1413253..1413789 (+) 537 WP_327708514.1 TerD family protein -
  OG912_RS06065 (OG912_06065) - 1413894..1416800 (-) 2907 WP_326739271.1 vitamin B12-dependent ribonucleotide reductase -
  OG912_RS06070 (OG912_06070) nrdR 1416959..1417471 (-) 513 WP_148021323.1 transcriptional regulator NrdR -
  OG912_RS06075 (OG912_06075) dinR/lexA 1418023..1418817 (+) 795 WP_219573501.1 transcriptional repressor LexA Regulator
  OG912_RS06080 (OG912_06080) - 1418902..1420872 (-) 1971 WP_327708515.1 ATP-dependent DNA helicase -
  OG912_RS06085 (OG912_06085) - 1420923..1422908 (-) 1986 WP_327708516.1 IucA/IucC family siderophore biosynthesis protein -
  OG912_RS06090 (OG912_06090) - 1422969..1423706 (-) 738 WP_327708517.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 28622.39 Da        Isoelectric Point: 6.9854

>NTDB_id=648314 OG912_RS06075 WP_219573501.1 1418023..1418817(+) (dinR/lexA) [Streptomyces sp. NBC_00464]
MTTTADSAIITAQDRSQSRLEPVHAMNDSVTNTEGPEPARPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYP
PSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQPTDTTGKPAASYVPLVGRIAAGGPILAE
ESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHN
SAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=648314 OG912_RS06075 WP_219573501.1 1418023..1418817(+) (dinR/lexA) [Streptomyces sp. NBC_00464]
GTGACCACCACCGCAGACAGTGCCATCATCACTGCCCAGGACCGCTCCCAGAGCCGACTCGAGCCGGTGCATGCCATGAA
TGACTCAGTCACGAACACGGAGGGGCCGGAGCCCGCGCGCCCAGCGCGCTCGCTGCCCGGACGACCTCCTGGAATCCGGG
CGGACAGCTCGGGGCTCACGGACCGGCAGCGGCGAGTGATCGAGGTCATCCGGGACTCCGTACAACGGCGGGGTTACCCC
CCGTCGATGCGGGAGATCGGTCAGGCGGTGGGCCTTTCCAGCACGTCCTCCGTCGCACATCAGCTGATGGCCCTGGAGCG
CAAGGGCTTCCTGCGCCGCGACCCCCATCGCCCCCGGGCGTACGAGGTGCGCGGTTCGGACCAGCCGAGCACACAGCCCA
CGGACACCACCGGCAAGCCCGCGGCATCGTACGTGCCGTTGGTCGGCCGGATCGCGGCCGGTGGGCCGATCCTCGCCGAG
GAATCGGTCGAGGACGTGTTCCCCCTCCCCCGCCAGCTGGTCGGGGACGGAGAGCTCTTCGTGCTGAAGGTTGTCGGTGA
CTCGATGATCGAAGCGGCGATCTGTGACGGGGACTGGGTCACCGTACGACGCCAGCCCGTGGCGGAGAACGGCGACATCG
TGGCCGCCATGCTGGACGGCGAGGCCACGGTCAAGCGGTTCAAGCGCGAGGACGGCCATGTGTGGCTGCTCCCGCACAAC
TCCGCGTACCAGCCGATCCCCGGCGACGAGGCGACGATCCTCGGCAAGGTCGTGGCGGTGCTCCGGCGGGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(146-258)

LexA DNA binding domain (LexA_DNA_bind)

(57-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80.303

0.371