Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | L2O48_RS11245 | Genome accession | NZ_CP091185 |
| Coordinates | 2400778..2401077 (+) | Length | 99 a.a. |
| NCBI ID | WP_017047776.1 | Uniprot ID | A0A1Y0NUT1 |
| Organism | Vibrio anguillarum strain J382 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2395778..2406077
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L2O48_RS11230 (L2O48_11230) | lon | 2395799..2398150 (+) | 2352 | WP_013857184.1 | endopeptidase La | - |
| L2O48_RS11235 (L2O48_11235) | - | 2398346..2398618 (+) | 273 | WP_026027116.1 | HU family DNA-binding protein | - |
| L2O48_RS11240 (L2O48_11240) | ppiD | 2398776..2400641 (+) | 1866 | WP_013857182.1 | peptidylprolyl isomerase | - |
| L2O48_RS11245 (L2O48_11245) | comEA | 2400778..2401077 (+) | 300 | WP_017047776.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| L2O48_RS11250 (L2O48_11250) | cmk | 2401241..2401921 (+) | 681 | WP_013857180.1 | (d)CMP kinase | - |
| L2O48_RS11255 (L2O48_11255) | rpsA | 2402025..2403695 (+) | 1671 | WP_013857179.1 | 30S ribosomal protein S1 | - |
| L2O48_RS11260 (L2O48_11260) | ihfB | 2403772..2404056 (+) | 285 | WP_010317449.1 | integration host factor subunit beta | - |
| L2O48_RS11265 (L2O48_11265) | - | 2404198..2404473 (+) | 276 | WP_013857177.1 | lipopolysaccharide assembly protein LapA domain-containing protein | - |
| L2O48_RS11270 (L2O48_11270) | lapB | 2404493..2405662 (+) | 1170 | WP_026028046.1 | lipopolysaccharide assembly protein LapB | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10804.74 Da Isoelectric Point: 9.6909
>NTDB_id=648241 L2O48_RS11245 WP_017047776.1 2400778..2401077(+) (comEA) [Vibrio anguillarum strain J382]
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAVTVRQNAERIIL
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAVTVRQNAERIIL
Nucleotide
Download Length: 300 bp
>NTDB_id=648241 L2O48_RS11245 WP_017047776.1 2400778..2401077(+) (comEA) [Vibrio anguillarum strain J382]
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGTTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGTTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
59.223 |
100 |
0.616 |
| comEA | Vibrio cholerae strain A1552 |
59.223 |
100 |
0.616 |
| comEA | Vibrio campbellii strain DS40M4 |
58.163 |
98.99 |
0.576 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
58.889 |
90.909 |
0.535 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.286 |
100 |
0.444 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
40 |
100 |
0.444 |
| comEA | Legionella pneumophila str. Paris |
36.735 |
98.99 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.735 |
98.99 |
0.364 |