Detailed information NTG0648235

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: L2O48_RS08675
• Genome accession: NZ_CP091185
• Coordinates: 1822679..1826071 (-)
• Length: 1130 a.a.
• NCBI ID: WP_029189901.1
• Uniprot ID: A0AAW4ADI7
• Organism: Vibrio anguillarum strain J382
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1817679..1831071

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2O48_RS08660 (L2O48_08660)	-	1818084..1819109 (-)	1026	WP_013857641.1	ABC transporter permease	-
L2O48_RS08665 (L2O48_08665)	-	1819112..1820098 (-)	987	WP_013857640.1	ABC transporter permease	-
L2O48_RS08670 (L2O48_08670)	-	1820265..1821935 (-)	1671	WP_013857639.1	ABC transporter substrate-binding protein	-
L2O48_RS08675 (L2O48_08675)	chiS	1822679..1826071 (-)	3393	WP_029189901.1	response regulator	Regulator
L2O48_RS08680 (L2O48_08680)	rsmC	1826271..1827314 (-)	1044	WP_013857636.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
L2O48_RS08685 (L2O48_08685)	-	1827399..1828484 (-)	1086	WP_013857635.1	AI-2E family transporter	-
L2O48_RS08690 (L2O48_08690)	hemL	1828762..1830057 (-)	1296	WP_026028237.1	glutamate-1-semialdehyde 2,1-aminomutase	-
L2O48_RS08695 (L2O48_08695)	erpA	1830380..1830721 (+)	342	WP_026027518.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 127851.52 Da
• Isoelectric Point: 6.2690

>NTDB_id=648235 L2O48_RS08675 WP_029189901.1 1822679..1826071(-) (chiS) [Vibrio anguillarum strain J382]
MFRFSRKQKFKRLQNTLMLAFLVLSITPLTVTAIFFLQSHTKDLQEQSTSHLLSVRDTKQQQVLDYLTAKESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGLDIDQAREHAQQRYIPGSGDQIKTSILPQSSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDLDGDVVYSVYKHDNYGTNLLTGKYKDSNLGKTFRQLEQQVGEQRKINEEYTPVIISDFSQQEGQSVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLVADTNATSQIRTLLVGQDHHSRILSYTQQEIETSQKVINLALSGLSAVGTYTNTLNEK
TIAAYAPVANKNINWALVVEIPEKEAYARVHQLEKLFIFAMLTAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
NVINTDRKDEIGRLAVSFERMQRSIREKMQLIKAQNKELESNIQLIRKQNDELHLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGSSGTITADHRYQLGIIISSGQRLTNLVDDLLDYHKMRYGSLDIKQCAVDLSGATRLVLELSNHLLNKKPIRV
INQIPDECIWVSADPQRLEQVLYNLVGNAIKYTTEGKIVISANVVDDKIRVQVVDTGQGIPAEQLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMQGTLYVSSQPMVGTTFSFTLPLASKAEIESTSYMEAGHFQSPTISDIELPEMHSLPENKE
GPVLLIADDEPVNLRVLDSFLRLEGYQVRTAKDGNEVISAVEKEKPELLLLDIMMPGLSGYQVCEKLRETYDHAELPIIM
LTALNQTDDRVRGFAAGANDYLSKPFNKQELAARITAHLTASKAEQRRIENNQLQQELKHRAMVEASLLETQGRLLEQLE
SAPEAIICIRDDHKIRFANEAAARLFRRSQEQLKRSNAEELIAPKYLVVEQEHYCGNIDIYVEDTRQHMSADVLRLPDGS
GLQAMYIFNVGGNINAARINNLETAIEALSSYAFEGDKEKLQQLKELGGEFTRIADKVSGESQSKQDLMREVLVEAMTSA
LDYWERVSNQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILDHCQEHGPERSHIEAQRD
KLQKLLTSSL

Nucleotide

• Length: 3393 bp

>NTDB_id=648235 L2O48_RS08675 WP_029189901.1 1822679..1826071(-) (chiS) [Vibrio anguillarum strain J382]
ATGTTTAGGTTCTCTCGTAAGCAAAAATTTAAGCGCCTGCAAAATACTCTTATGCTGGCTTTTCTCGTTTTGAGCATCAC
GCCTTTAACTGTGACTGCCATTTTTTTTCTGCAATCACACACTAAAGATCTTCAAGAACAAAGCACGTCTCACTTATTGT
CAGTCAGAGACACTAAGCAACAGCAAGTTCTCGATTACCTCACGGCCAAAGAATCAGAAGTGATGGGGTTTGTCCGTTCA
GAGTTAGCTTATGCTAGTGGAGGGCGCTTTTACGGCTTAGTCAATGCGTTCCAAAGACTTGGTCTGGATATTGATCAAGC
TCGTGAGCATGCCCAGCAGCGTTATATTCCTGGTTCTGGTGATCAGATAAAAACGTCAATATTGCCACAATCGAGCAGCT
ATGTAGGCAGTGAACGGTATCGCCTACTGCACAAACGCTATCATTGGGCGTATTTAGAACTGCTTAAACGTTCTGATTTT
GACGATATTTTACTGGTGGATCTCGATGGTGATGTCGTTTATTCCGTTTATAAGCACGACAACTATGGGACGAATTTACT
GACCGGAAAATACAAAGATAGCAATCTGGGTAAAACATTCCGTCAGTTAGAGCAGCAAGTTGGCGAACAACGAAAAATCA
ATGAAGAATATACACCAGTCATTATTTCTGATTTTTCACAACAAGAAGGGCAATCAGTTGCTTGGCTTGGCGCGCCCATT
ATTCAACAGGGCTACCTGCACAGCTACGCCATGTTCCGCCTACCAAACAATGGCATCACAAAGCTCGTTGCTGACACCAA
TGCGACATCGCAAATAAGGACTTTACTCGTCGGGCAAGATCATCATTCTCGAATACTCTCTTACACGCAGCAAGAAATCG
AGACTAGTCAAAAAGTGATCAATCTTGCGCTTTCTGGATTGAGTGCCGTTGGTACTTACACTAATACATTGAATGAGAAA
ACCATTGCCGCCTATGCACCTGTTGCAAACAAAAACATCAATTGGGCCTTGGTCGTAGAGATACCAGAAAAAGAGGCTTA
TGCGCGAGTTCATCAGCTTGAGAAGTTATTTATTTTCGCCATGCTAACCGCGATTATTTTAGTCGTCATCGCTTCACATT
ATCTCTCTAATTTTATTACCTCTCCCCTACTGAAGCTCACTTGGGCGGCAGAAAAAGTCTCAGCTGGGGATTTAGATGAA
AATGTTATCAATACCGATCGTAAAGATGAGATTGGTCGACTCGCAGTGAGTTTTGAACGTATGCAGCGTTCAATCCGAGA
AAAAATGCAGCTGATTAAAGCGCAAAATAAAGAGCTCGAAAGCAACATTCAATTAATCCGCAAACAGAACGATGAGTTGC
ATCTCGCTAACAAACTAAAAGATGAATTCCTAGCCACAACGTCACATGAATTAAGAACACCTCTACACGGTATGGTCGGT
ATTGCAGAAGCACTGATCTCTGGGTCAAGTGGAACTATCACCGCCGATCATCGTTATCAATTGGGCATAATCATCAGCAG
TGGACAACGGCTGACAAACTTGGTCGATGACTTACTCGATTACCATAAAATGCGCTATGGCAGCTTGGATATCAAACAGT
GTGCTGTTGATCTATCCGGCGCAACACGCTTAGTGTTAGAGCTGTCTAACCATCTACTCAACAAAAAGCCCATTCGCGTA
ATAAACCAAATCCCTGATGAATGCATTTGGGTCTCTGCCGATCCACAACGATTAGAGCAAGTGCTTTATAACCTTGTAGG
AAACGCCATTAAATATACGACTGAAGGGAAAATTGTCATTTCAGCCAATGTGGTTGATGACAAGATTCGTGTCCAAGTTG
TCGATACGGGACAAGGCATTCCTGCTGAACAACTTGAACACATTTTCGAACCACTGATTCAAGCAGGGCAAGATGCTAGT
CGTTATCGACAAGGCGCAGGCTTGGGCCTTTCGATCAGCCGTCAATTGATCGAATTAATGCAAGGAACGCTTTATGTCAG
TAGCCAACCTATGGTCGGTACGACATTCAGCTTTACCTTACCATTAGCATCAAAAGCGGAAATTGAGTCGACAAGCTATA
TGGAAGCTGGCCATTTCCAATCTCCGACCATTTCAGACATTGAACTGCCTGAAATGCATTCACTACCTGAAAATAAAGAA
GGCCCAGTGCTACTGATAGCAGATGATGAACCCGTCAATCTGCGTGTCCTAGACAGCTTCCTACGTTTAGAAGGCTATCA
AGTCCGCACCGCTAAAGATGGCAATGAAGTCATTAGCGCGGTCGAAAAAGAAAAACCGGAACTTCTACTGCTCGACATTA
TGATGCCAGGATTAAGCGGCTACCAAGTCTGTGAAAAGTTAAGAGAAACATACGATCATGCCGAGCTACCTATCATTATG
TTGACGGCATTAAATCAAACTGACGATAGAGTTCGTGGTTTTGCAGCGGGAGCGAACGATTACTTATCGAAACCTTTTAA
TAAGCAAGAGCTCGCTGCACGTATTACGGCGCATTTAACGGCCAGCAAAGCTGAACAAAGACGTATTGAGAACAACCAAC
TGCAACAAGAGCTGAAGCATAGAGCAATGGTAGAGGCCAGTTTATTGGAAACCCAAGGCCGTCTACTAGAGCAGCTTGAA
TCCGCTCCTGAGGCCATTATTTGCATTCGAGACGATCATAAAATCCGCTTTGCGAACGAAGCGGCTGCTCGGTTATTTAG
GCGCAGCCAAGAACAACTAAAGCGCTCAAATGCGGAAGAACTCATCGCCCCCAAATACTTAGTCGTCGAGCAAGAGCATT
ACTGCGGTAATATCGATATCTATGTCGAAGATACACGTCAACATATGTCTGCTGATGTGTTACGCCTACCGGATGGCTCT
GGGTTGCAGGCTATGTACATCTTTAACGTGGGTGGAAACATCAATGCAGCGCGCATCAATAACCTTGAAACCGCTATTGA
AGCGCTATCCAGTTACGCATTTGAAGGCGATAAAGAAAAACTGCAGCAGCTCAAAGAACTCGGTGGCGAGTTCACACGTA
TCGCCGACAAAGTATCGGGAGAGAGTCAATCTAAGCAAGATTTAATGCGCGAAGTACTGGTTGAAGCAATGACCAGTGCT
TTAGATTACTGGGAACGGGTCAGTAACCAAAGCAAGTTTACCTTTGCAGAGCAGAGTGGGCTATGGCGAGTGTATCTCGA
TAGAAGCACATTACAGACTCGGACACTAGACAAGTACTTACGTATCGAGACACTGCCTAAAACACCTCGCTGGCGTACCG
TTCTTAATTCGTTAGATTACATTCTTGATCATTGTCAGGAGCACGGCCCTGAACGCTCTCACATCGAAGCGCAGCGCGAT
AAATTGCAAAAGCTACTGACCTCATCACTCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• PAS fold (PAS) (876-926)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (725-835)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	81.738	99.823	0.816