Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | SCAZ3_RS05590 | Genome accession | NZ_AIDX01000001 |
| Coordinates | 1158237..1159190 (+) | Length | 317 a.a. |
| NCBI ID | WP_003046195.1 | Uniprot ID | A0AAE4Q9T5 |
| Organism | Streptococcus canis FSL Z3-227 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1153237..1164190
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SCAZ3_RS05550 (SCAZ3_00925) | - | 1154063..1154428 (+) | 366 | WP_003046179.1 | DUF1033 family protein | - |
| SCAZ3_RS05555 (SCAZ3_00930) | comYA | 1154515..1155456 (+) | 942 | WP_003046182.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SCAZ3_RS05560 (SCAZ3_00935) | comYB | 1155389..1156423 (+) | 1035 | WP_223824829.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SCAZ3_RS05565 (SCAZ3_00940) | comGC/cglC | 1156426..1156752 (+) | 327 | WP_003046186.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SCAZ3_RS05570 (SCAZ3_00945) | comGD | 1156727..1157155 (+) | 429 | WP_039994748.1 | competence type IV pilus minor pilin ComGD | - |
| SCAZ3_RS05575 (SCAZ3_00950) | comGE | 1157133..1157408 (+) | 276 | WP_003046190.1 | competence type IV pilus minor pilin ComGE | - |
| SCAZ3_RS05580 (SCAZ3_00955) | comGF | 1157389..1157829 (+) | 441 | WP_003046192.1 | competence type IV pilus minor pilin ComGF | - |
| SCAZ3_RS05585 (SCAZ3_00960) | comGG | 1157807..1158187 (+) | 381 | WP_003046193.1 | competence type IV pilus minor pilin ComGG | - |
| SCAZ3_RS05590 (SCAZ3_00965) | comYH | 1158237..1159190 (+) | 954 | WP_003046195.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SCAZ3_RS05595 (SCAZ3_00970) | - | 1159249..1160445 (+) | 1197 | WP_003046198.1 | acetate kinase | - |
| SCAZ3_RS05600 (SCAZ3_00975) | - | 1160768..1160974 (+) | 207 | WP_003046200.1 | helix-turn-helix transcriptional regulator | - |
| SCAZ3_RS05605 (SCAZ3_00980) | - | 1161132..1161503 (+) | 372 | WP_003046201.1 | hypothetical protein | - |
| SCAZ3_RS05610 (SCAZ3_00985) | proC | 1161707..1162483 (-) | 777 | WP_003046203.1 | pyrroline-5-carboxylate reductase | - |
| SCAZ3_RS05615 (SCAZ3_00990) | pepA | 1162531..1163598 (-) | 1068 | WP_003046205.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35915.02 Da Isoelectric Point: 4.7866
>NTDB_id=64780 SCAZ3_RS05590 WP_003046195.1 1158237..1159190(+) (comYH) [Streptococcus canis FSL Z3-227]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNIDKLKALCLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDTIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEVMDSS
AHFIQEDAVRPQLLKESDVVISDLPVGYYPNDAIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKHWLKGYAQVVALITLPDTIFGHPSNAKSIIVLQKQTDRPMETFVYPIRDLKLAENIHALMDNFKKWKLDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNIDKLKALCLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDTIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEVMDSS
AHFIQEDAVRPQLLKESDVVISDLPVGYYPNDAIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKHWLKGYAQVVALITLPDTIFGHPSNAKSIIVLQKQTDRPMETFVYPIRDLKLAENIHALMDNFKKWKLDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=64780 SCAZ3_RS05590 WP_003046195.1 1158237..1159190(+) (comYH) [Streptococcus canis FSL Z3-227]
ATGAATTTTGAAAAAATTGAAGAAGCTTATCAGTTGCTTTTAGAGAATAGCCAACTGATTGAAAATGACTTAAAAACCCA
TATTTATGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCAGAGGGAGCCAGTCCTCAGGTGGCTCAAAACATTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGCAGAGCCTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAACAACTGCAAGCCAACCATCAGTTCACACCAGATACTATTGGTTTTATTCTTCTCTATCTGTTGGAACAATTGAGCGA
TAAAGATAGCTTAGAGGTGCTTGAAATTGGGAGTGGAACAGGGAACCTAGCTCAAACCCTTCTCAACAACACGAGCAAGT
CTCTTGATTATGTAGGAATTGAACTTGATGATCTCTTGATTGATTTGTCAGCCAGCATTGCAGAGGTGATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCAGTAAGACCTCAATTATTGAAAGAAAGTGATGTTGTCATCAGTGACTTGCCAGTTGG
CTATTATCCTAACGATGCTATTGCCAAACGTTACAAGGTGGCTAGTTCAGATGAGCATACGTATGCTCACCATTTATTAA
TGGAACAGTCTCTAAAATACTTGAAAAAAGATGGCTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACATTGGTTAAAAGGATATGCTCAGGTGGTGGCTCTAATTACTCTACCAGACACCATTTTTGGTCA
TCCATCCAATGCCAAGTCTATTATTGTCTTGCAAAAACAAACAGACCGCCCAATGGAAACCTTTGTTTATCCAATTCGGG
ACTTGAAACTTGCAGAGAATATTCATGCTCTTATGGATAATTTCAAAAAGTGGAAACTGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCTTATCAGTTGCTTTTAGAGAATAGCCAACTGATTGAAAATGACTTAAAAACCCA
TATTTATGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCAGAGGGAGCCAGTCCTCAGGTGGCTCAAAACATTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGCAGAGCCTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAACAACTGCAAGCCAACCATCAGTTCACACCAGATACTATTGGTTTTATTCTTCTCTATCTGTTGGAACAATTGAGCGA
TAAAGATAGCTTAGAGGTGCTTGAAATTGGGAGTGGAACAGGGAACCTAGCTCAAACCCTTCTCAACAACACGAGCAAGT
CTCTTGATTATGTAGGAATTGAACTTGATGATCTCTTGATTGATTTGTCAGCCAGCATTGCAGAGGTGATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCAGTAAGACCTCAATTATTGAAAGAAAGTGATGTTGTCATCAGTGACTTGCCAGTTGG
CTATTATCCTAACGATGCTATTGCCAAACGTTACAAGGTGGCTAGTTCAGATGAGCATACGTATGCTCACCATTTATTAA
TGGAACAGTCTCTAAAATACTTGAAAAAAGATGGCTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACATTGGTTAAAAGGATATGCTCAGGTGGTGGCTCTAATTACTCTACCAGACACCATTTTTGGTCA
TCCATCCAATGCCAAGTCTATTATTGTCTTGCAAAAACAAACAGACCGCCCAATGGAAACCTTTGTTTATCCAATTCGGG
ACTTGAAACTTGCAGAGAATATTCATGCTCTTATGGATAATTTCAAAAAGTGGAAACTGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.772 |
99.685 |
0.666 |
| comYH | Streptococcus mutans UA159 |
66.456 |
99.685 |
0.662 |