Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   L1999_RS06275 Genome accession   NZ_CP091110
Coordinates   1315242..1315442 (+) Length   66 a.a.
NCBI ID   WP_275677393.1    Uniprot ID   -
Organism   Neobacillus drentensis strain JC05     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1310242..1320442
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L1999_RS06255 (L1999_06255) clpB 1310328..1312928 (+) 2601 WP_235742767.1 ATP-dependent chaperone ClpB -
  L1999_RS06260 (L1999_06260) - 1313039..1313224 (-) 186 WP_215040210.1 YjzD family protein -
  L1999_RS06265 (L1999_06265) - 1313407..1314129 (+) 723 WP_235742768.1 hydrolase -
  L1999_RS06270 (L1999_06270) - 1314210..1315031 (+) 822 WP_235742769.1 hypothetical protein -
  L1999_RS06275 (L1999_06275) comZ 1315242..1315442 (+) 201 WP_275677393.1 ComZ family protein Regulator
  L1999_RS06280 (L1999_06280) - 1315462..1315737 (-) 276 WP_235742770.1 hypothetical protein -
  L1999_RS06285 (L1999_06285) - 1315943..1316875 (+) 933 WP_235742771.1 beta-ketoacyl-ACP synthase III -
  L1999_RS06290 (L1999_06290) fabF 1316925..1318163 (+) 1239 WP_235742772.1 beta-ketoacyl-ACP synthase II -
  L1999_RS06295 (L1999_06295) - 1318296..1319084 (+) 789 WP_235742773.1 DUF2268 domain-containing protein -
  L1999_RS06300 (L1999_06300) - 1319227..1320270 (+) 1044 WP_235742774.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 66 a.a.        Molecular weight: 7617.78 Da        Isoelectric Point: 4.3010

>NTDB_id=647772 L1999_RS06275 WP_275677393.1 1315242..1315442(+) (comZ) [Neobacillus drentensis strain JC05]
MNNQDNTLQFMQIAMKHLPEAKEQLDQAGVELTMDLIQPFMNLFTKVMQEAYELGKEDALKESLSK

Nucleotide


Download         Length: 201 bp        

>NTDB_id=647772 L1999_RS06275 WP_275677393.1 1315242..1315442(+) (comZ) [Neobacillus drentensis strain JC05]
GTGAACAATCAAGACAATACACTACAATTTATGCAGATTGCAATGAAACACTTACCGGAGGCAAAAGAGCAATTAGACCA
AGCAGGGGTTGAACTAACGATGGATCTTATTCAGCCCTTTATGAATTTATTTACTAAAGTAATGCAGGAAGCCTATGAAC
TTGGTAAAGAAGATGCTCTTAAGGAAAGTCTAAGTAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(6-59)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

66.667

90.909

0.606