Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | OHN37_RS36785 | Genome accession | NZ_CP107878 |
| Coordinates | 8073031..8075565 (-) | Length | 844 a.a. |
| NCBI ID | WP_266524993.1 | Uniprot ID | - |
| Organism | Streptomyces sp. NBC_00485 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 8068031..8080565
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OHN37_RS36770 (OHN37_36745) | - | 8068669..8070234 (-) | 1566 | WP_266524990.1 | alpha/beta fold hydrolase | - |
| OHN37_RS36775 (OHN37_36750) | - | 8070351..8071112 (-) | 762 | WP_266524991.1 | hypothetical protein | - |
| OHN37_RS36780 (OHN37_36755) | ggt | 8071219..8073030 (+) | 1812 | WP_327667495.1 | gamma-glutamyltransferase | - |
| OHN37_RS36785 (OHN37_36760) | clpC | 8073031..8075565 (-) | 2535 | WP_266524993.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| OHN37_RS36790 (OHN37_36765) | map | 8075794..8076561 (-) | 768 | WP_266524995.1 | type I methionyl aminopeptidase | - |
| OHN37_RS36795 (OHN37_36770) | - | 8076594..8076845 (+) | 252 | WP_266591145.1 | helix-turn-helix transcriptional regulator | - |
| OHN37_RS36800 (OHN37_36775) | - | 8076972..8078597 (+) | 1626 | WP_327667496.1 | hypothetical protein | - |
| OHN37_RS36805 (OHN37_36780) | - | 8078789..8079631 (+) | 843 | WP_266525001.1 | nitrilase-related carbon-nitrogen hydrolase | - |
Sequence
Protein
Download Length: 844 a.a. Molecular weight: 92076.27 Da Isoelectric Point: 4.9238
>NTDB_id=647762 OHN37_RS36785 WP_266524993.1 8073031..8075565(-) (clpC) [Streptomyces sp. NBC_00485]
MTSGFSGPEGYDAFGEFLARFFGGPRQGPRQIDIGRLLSQPARELVRGAAQYAAEHGSRDLDTQHLLRAALSSEPTRSLL
SRAGADPDSLASEIDERSGPAQHTPEEAPAPTSLSLTPAVKRALLDAHDLARASGAGYIGPEHVLSALAANPDSAAGHIL
NSARFAPTGPPEAADTAQSRAEHSRATGTPTLDKYGRDLTELARQGRIDPVIGRDEEIEQTIEVLSRRGKNNPVLIGDAG
VGKTAIVEGLAQRIADGDVPDVLIGRRVVALDLTGVVAGTRYRGDFEERLNNIVGEIRAHSDQLIVFIDEVHTVVGAGGG
GEGGAMDAGNILKPALARGELHIVGATTLEEFRRIEKDAALARRFQPILVPEPSVPDTIEILRGLRDRYEAHHQVRYADE
ALVAAVELSDRYLTDRRLPDKAIDLIDQAGARVRLRARTKGTDVRALEREIEQLTCDKDQAVADEKYETATQLRDRIAEL
KVRIADTSGGDEADEGQLEVTAEAIAEVVSRQTGIPVSSLTQEEKEKLLRLAEHLHERVVGQEEAVDVVAEAVMRSRAGL
ASPDRPIGSFLFLGPTGVGKTELARALAEALFGSEERMVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEVVRRHPY
SLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEAITRRGAGIGFGAGGADADEEARREQIL
RPLREHFRPEFLNRIDEIVVFRQLTGDQLRRITNLLLERTRRLLQAQGVTVEFTDPAVDWLAERGYQPEYGARPLRRTIQ
REVDNRLSRLLLDGRVGEGGRVTVDVEDGRLAFRTEDLPTAPEL
MTSGFSGPEGYDAFGEFLARFFGGPRQGPRQIDIGRLLSQPARELVRGAAQYAAEHGSRDLDTQHLLRAALSSEPTRSLL
SRAGADPDSLASEIDERSGPAQHTPEEAPAPTSLSLTPAVKRALLDAHDLARASGAGYIGPEHVLSALAANPDSAAGHIL
NSARFAPTGPPEAADTAQSRAEHSRATGTPTLDKYGRDLTELARQGRIDPVIGRDEEIEQTIEVLSRRGKNNPVLIGDAG
VGKTAIVEGLAQRIADGDVPDVLIGRRVVALDLTGVVAGTRYRGDFEERLNNIVGEIRAHSDQLIVFIDEVHTVVGAGGG
GEGGAMDAGNILKPALARGELHIVGATTLEEFRRIEKDAALARRFQPILVPEPSVPDTIEILRGLRDRYEAHHQVRYADE
ALVAAVELSDRYLTDRRLPDKAIDLIDQAGARVRLRARTKGTDVRALEREIEQLTCDKDQAVADEKYETATQLRDRIAEL
KVRIADTSGGDEADEGQLEVTAEAIAEVVSRQTGIPVSSLTQEEKEKLLRLAEHLHERVVGQEEAVDVVAEAVMRSRAGL
ASPDRPIGSFLFLGPTGVGKTELARALAEALFGSEERMVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEVVRRHPY
SLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEAITRRGAGIGFGAGGADADEEARREQIL
RPLREHFRPEFLNRIDEIVVFRQLTGDQLRRITNLLLERTRRLLQAQGVTVEFTDPAVDWLAERGYQPEYGARPLRRTIQ
REVDNRLSRLLLDGRVGEGGRVTVDVEDGRLAFRTEDLPTAPEL
Nucleotide
Download Length: 2535 bp
>NTDB_id=647762 OHN37_RS36785 WP_266524993.1 8073031..8075565(-) (clpC) [Streptomyces sp. NBC_00485]
ATGACCAGCGGCTTCAGCGGACCAGAAGGCTATGACGCCTTCGGAGAATTCCTCGCCCGCTTCTTCGGCGGCCCGCGTCA
GGGCCCCCGCCAGATCGACATAGGGAGGCTGCTGAGCCAGCCCGCCCGGGAACTGGTCCGCGGCGCCGCCCAGTATGCGG
CCGAGCACGGCAGCCGGGACCTCGACACCCAGCATCTGCTGCGTGCCGCGCTCTCCAGCGAGCCGACCCGGAGTCTGCTC
AGCCGGGCCGGCGCAGACCCCGACTCACTGGCGTCGGAGATCGACGAGCGCTCCGGCCCTGCCCAGCACACGCCGGAGGA
GGCGCCTGCGCCCACCTCGCTCTCCCTAACCCCCGCGGTCAAGCGTGCCCTCCTCGACGCCCACGACCTGGCGCGGGCGA
GCGGAGCCGGCTACATCGGCCCCGAGCACGTCCTCAGCGCCCTGGCCGCGAACCCCGACTCGGCCGCCGGGCACATCCTC
AACTCGGCCCGTTTCGCGCCCACCGGGCCGCCCGAGGCGGCGGACACCGCCCAGAGCCGGGCCGAGCACTCCCGCGCCAC
GGGCACGCCCACCCTGGACAAGTACGGTCGCGACCTCACCGAGCTGGCCCGGCAGGGCCGTATCGACCCGGTGATCGGGC
GGGACGAGGAGATCGAGCAGACCATCGAGGTGCTGTCGCGACGCGGCAAGAACAACCCGGTGCTCATCGGGGACGCGGGC
GTCGGCAAGACCGCCATCGTGGAGGGGCTCGCGCAGCGCATCGCCGACGGGGACGTGCCCGACGTGCTGATCGGGCGGCG
GGTCGTCGCCCTCGACCTGACGGGGGTCGTCGCCGGCACCCGCTACCGGGGTGACTTCGAGGAACGTCTGAACAACATCG
TCGGTGAAATCCGGGCCCACTCCGACCAGTTGATCGTCTTCATCGACGAGGTGCACACCGTCGTCGGCGCCGGAGGCGGT
GGCGAGGGCGGGGCGATGGACGCCGGGAACATCCTGAAGCCGGCCCTCGCCCGCGGCGAGCTGCACATCGTCGGCGCCAC
CACGCTGGAGGAGTTCCGCCGGATCGAGAAGGACGCGGCGCTGGCCCGCCGCTTCCAGCCGATCCTGGTGCCCGAACCGT
CCGTGCCGGACACCATCGAGATCCTGCGCGGGCTGCGCGACCGCTACGAGGCCCACCACCAGGTCCGCTACGCCGACGAG
GCCCTGGTGGCCGCGGTCGAGCTGTCCGACCGCTACCTCACCGACCGCCGGCTGCCCGACAAGGCCATCGACCTGATCGA
CCAGGCCGGAGCCCGGGTACGGCTGCGGGCACGCACGAAGGGCACGGACGTACGGGCCCTGGAGCGCGAGATCGAGCAGC
TGACCTGCGACAAGGACCAGGCGGTCGCCGACGAGAAGTACGAGACGGCGACTCAACTGCGCGATCGTATCGCCGAGTTG
AAGGTGCGGATCGCGGACACCTCGGGTGGTGACGAGGCCGACGAGGGGCAGTTGGAGGTGACCGCCGAGGCGATCGCCGA
GGTGGTGTCCCGGCAGACGGGCATCCCGGTCAGCAGCCTCACCCAGGAGGAGAAGGAGAAGCTGCTTCGCCTGGCGGAGC
ACCTGCACGAGCGGGTCGTCGGACAGGAGGAGGCCGTCGACGTGGTCGCCGAGGCGGTCATGCGCTCCCGCGCCGGGCTC
GCGAGCCCCGACCGGCCGATCGGCAGCTTCCTCTTCCTCGGTCCGACCGGCGTCGGCAAGACCGAGCTGGCCCGCGCACT
CGCCGAGGCCCTGTTCGGCAGCGAGGAGCGCATGGTCCGCCTGGACATGAGCGAGTACCAGGAACGGCACACCGTCAGCC
GGCTGGTCGGCGCCCCGCCCGGCTACGTCGGCCACGAGGAGGCCGGCCAGCTCACCGAGGTCGTACGACGCCACCCGTAC
TCGCTCCTCCTGCTCGACGAGGTCGAGAAGGCGCACCCGGACGTCTTCAACATCCTGCTCCAGGTGCTCGACGACGGGCG
GCTCACCGACTCCCAGGGCCGCACGGTCGACTTCACCAACACGGTCATCGTGATGACCAGCAACCTCGGCTCCGAGGCGA
TCACCCGGCGCGGCGCCGGCATCGGCTTCGGAGCGGGCGGCGCCGACGCCGACGAGGAGGCGCGGCGCGAGCAGATCCTC
CGCCCCCTGCGCGAGCACTTCCGGCCCGAGTTCCTCAACCGCATCGACGAGATCGTCGTCTTCCGCCAGCTCACCGGCGA
CCAACTGCGCCGGATCACCAACCTGTTGCTGGAGAGGACCCGCCGTCTGCTGCAGGCACAGGGCGTCACGGTGGAGTTCA
CGGACCCGGCTGTCGACTGGCTCGCCGAGCGCGGCTACCAGCCCGAGTACGGTGCCCGCCCGCTGCGCCGCACCATCCAG
CGCGAGGTCGACAACCGGCTGTCGCGGCTGCTGCTCGACGGCCGGGTCGGCGAGGGCGGCCGGGTGACGGTGGACGTCGA
GGACGGCCGGCTGGCCTTCCGCACGGAGGACCTGCCGACCGCCCCCGAACTCTGA
ATGACCAGCGGCTTCAGCGGACCAGAAGGCTATGACGCCTTCGGAGAATTCCTCGCCCGCTTCTTCGGCGGCCCGCGTCA
GGGCCCCCGCCAGATCGACATAGGGAGGCTGCTGAGCCAGCCCGCCCGGGAACTGGTCCGCGGCGCCGCCCAGTATGCGG
CCGAGCACGGCAGCCGGGACCTCGACACCCAGCATCTGCTGCGTGCCGCGCTCTCCAGCGAGCCGACCCGGAGTCTGCTC
AGCCGGGCCGGCGCAGACCCCGACTCACTGGCGTCGGAGATCGACGAGCGCTCCGGCCCTGCCCAGCACACGCCGGAGGA
GGCGCCTGCGCCCACCTCGCTCTCCCTAACCCCCGCGGTCAAGCGTGCCCTCCTCGACGCCCACGACCTGGCGCGGGCGA
GCGGAGCCGGCTACATCGGCCCCGAGCACGTCCTCAGCGCCCTGGCCGCGAACCCCGACTCGGCCGCCGGGCACATCCTC
AACTCGGCCCGTTTCGCGCCCACCGGGCCGCCCGAGGCGGCGGACACCGCCCAGAGCCGGGCCGAGCACTCCCGCGCCAC
GGGCACGCCCACCCTGGACAAGTACGGTCGCGACCTCACCGAGCTGGCCCGGCAGGGCCGTATCGACCCGGTGATCGGGC
GGGACGAGGAGATCGAGCAGACCATCGAGGTGCTGTCGCGACGCGGCAAGAACAACCCGGTGCTCATCGGGGACGCGGGC
GTCGGCAAGACCGCCATCGTGGAGGGGCTCGCGCAGCGCATCGCCGACGGGGACGTGCCCGACGTGCTGATCGGGCGGCG
GGTCGTCGCCCTCGACCTGACGGGGGTCGTCGCCGGCACCCGCTACCGGGGTGACTTCGAGGAACGTCTGAACAACATCG
TCGGTGAAATCCGGGCCCACTCCGACCAGTTGATCGTCTTCATCGACGAGGTGCACACCGTCGTCGGCGCCGGAGGCGGT
GGCGAGGGCGGGGCGATGGACGCCGGGAACATCCTGAAGCCGGCCCTCGCCCGCGGCGAGCTGCACATCGTCGGCGCCAC
CACGCTGGAGGAGTTCCGCCGGATCGAGAAGGACGCGGCGCTGGCCCGCCGCTTCCAGCCGATCCTGGTGCCCGAACCGT
CCGTGCCGGACACCATCGAGATCCTGCGCGGGCTGCGCGACCGCTACGAGGCCCACCACCAGGTCCGCTACGCCGACGAG
GCCCTGGTGGCCGCGGTCGAGCTGTCCGACCGCTACCTCACCGACCGCCGGCTGCCCGACAAGGCCATCGACCTGATCGA
CCAGGCCGGAGCCCGGGTACGGCTGCGGGCACGCACGAAGGGCACGGACGTACGGGCCCTGGAGCGCGAGATCGAGCAGC
TGACCTGCGACAAGGACCAGGCGGTCGCCGACGAGAAGTACGAGACGGCGACTCAACTGCGCGATCGTATCGCCGAGTTG
AAGGTGCGGATCGCGGACACCTCGGGTGGTGACGAGGCCGACGAGGGGCAGTTGGAGGTGACCGCCGAGGCGATCGCCGA
GGTGGTGTCCCGGCAGACGGGCATCCCGGTCAGCAGCCTCACCCAGGAGGAGAAGGAGAAGCTGCTTCGCCTGGCGGAGC
ACCTGCACGAGCGGGTCGTCGGACAGGAGGAGGCCGTCGACGTGGTCGCCGAGGCGGTCATGCGCTCCCGCGCCGGGCTC
GCGAGCCCCGACCGGCCGATCGGCAGCTTCCTCTTCCTCGGTCCGACCGGCGTCGGCAAGACCGAGCTGGCCCGCGCACT
CGCCGAGGCCCTGTTCGGCAGCGAGGAGCGCATGGTCCGCCTGGACATGAGCGAGTACCAGGAACGGCACACCGTCAGCC
GGCTGGTCGGCGCCCCGCCCGGCTACGTCGGCCACGAGGAGGCCGGCCAGCTCACCGAGGTCGTACGACGCCACCCGTAC
TCGCTCCTCCTGCTCGACGAGGTCGAGAAGGCGCACCCGGACGTCTTCAACATCCTGCTCCAGGTGCTCGACGACGGGCG
GCTCACCGACTCCCAGGGCCGCACGGTCGACTTCACCAACACGGTCATCGTGATGACCAGCAACCTCGGCTCCGAGGCGA
TCACCCGGCGCGGCGCCGGCATCGGCTTCGGAGCGGGCGGCGCCGACGCCGACGAGGAGGCGCGGCGCGAGCAGATCCTC
CGCCCCCTGCGCGAGCACTTCCGGCCCGAGTTCCTCAACCGCATCGACGAGATCGTCGTCTTCCGCCAGCTCACCGGCGA
CCAACTGCGCCGGATCACCAACCTGTTGCTGGAGAGGACCCGCCGTCTGCTGCAGGCACAGGGCGTCACGGTGGAGTTCA
CGGACCCGGCTGTCGACTGGCTCGCCGAGCGCGGCTACCAGCCCGAGTACGGTGCCCGCCCGCTGCGCCGCACCATCCAG
CGCGAGGTCGACAACCGGCTGTCGCGGCTGCTGCTCGACGGCCGGGTCGGCGAGGGCGGCCGGGTGACGGTGGACGTCGA
GGACGGCCGGCTGGCCTTCCGCACGGAGGACCTGCCGACCGCCCCCGAACTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
49.506 |
95.972 |
0.475 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.018 |
98.697 |
0.444 |
| clpC | Streptococcus pneumoniae Rx1 |
44.778 |
98.697 |
0.442 |
| clpC | Streptococcus pneumoniae D39 |
44.778 |
98.697 |
0.442 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.926 |
96.564 |
0.424 |
| clpC | Streptococcus mutans UA159 |
42.806 |
98.815 |
0.423 |
| clpC | Streptococcus thermophilus LMD-9 |
46.277 |
89.1 |
0.412 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.011 |
89.1 |
0.41 |
| clpE | Streptococcus mutans UA159 |
53.376 |
73.697 |
0.393 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50.769 |
77.014 |
0.391 |
| clpE | Streptococcus pneumoniae R6 |
51.364 |
73.815 |
0.379 |
| clpE | Streptococcus pneumoniae D39 |
51.364 |
73.815 |
0.379 |
| clpE | Streptococcus pneumoniae Rx1 |
51.364 |
73.815 |
0.379 |
| clpE | Streptococcus pneumoniae TIGR4 |
51.364 |
73.815 |
0.379 |