Detailed information NTG0064768

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: SCAZ3_RS03790
• Genome accession: NZ_AIDX01000001
• Coordinates: 830307..832751 (-)
• Length: 814 a.a.
• NCBI ID: WP_003045629.1
• Uniprot ID: A0AAV3FV19
• Organism: Streptococcus canis FSL Z3-227
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 825307..837751

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCAZ3_RS03765 (SCAZ3_10830)	-	825310..825780 (+)	471	WP_003045620.1	8-oxo-dGTP diphosphatase	-
SCAZ3_RS03770 (SCAZ3_10835)	-	826123..827340 (-)	1218	WP_003045622.1	MFS transporter	-
SCAZ3_RS11585 (SCAZ3_10840)	-	827346..827861 (-)	516	WP_003045624.1	lanthionine synthetase LanC family protein	-
SCAZ3_RS12070	-	827827..827922 (-)	96	Protein_760	Rgg/GadR/MutR family transcriptional regulator	-
SCAZ3_RS03780 (SCAZ3_10845)	groL	828178..829803 (-)	1626	WP_003045626.1	chaperonin GroEL	-
SCAZ3_RS03785 (SCAZ3_10850)	groES	829839..830129 (-)	291	WP_003045628.1	co-chaperone GroES	-
SCAZ3_RS03790 (SCAZ3_10855)	clpC	830307..832751 (-)	2445	WP_003045629.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
SCAZ3_RS03795 (SCAZ3_10860)	-	832751..833212 (-)	462	WP_003045631.1	CtsR family transcriptional regulator	-
SCAZ3_RS03800 (SCAZ3_10865)	-	833411..833614 (-)	204	WP_003045634.1	cold-shock protein	-
SCAZ3_RS03805 (SCAZ3_10870)	-	833950..834906 (+)	957	WP_003045636.1	amidohydrolase family protein	-
SCAZ3_RS03810 (SCAZ3_10875)	-	835042..835470 (+)	429	WP_003045638.1	MarR family winged helix-turn-helix transcriptional regulator	-
SCAZ3_RS03815 (SCAZ3_10880)	-	835484..836875 (+)	1392	WP_003045640.1	GNAT family N-acetyltransferase	-
SCAZ3_RS03820 (SCAZ3_10885)	-	836973..837251 (+)	279	WP_003045642.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 814 a.a.
• Molecular weight: 90301.97 Da
• Isoelectric Point: 6.8332

>NTDB_id=64768 SCAZ3_RS03790 WP_003045629.1 830307..832751(-) (clpC) [Streptococcus canis FSL Z3-227]
MIMYSLKMQEIFRQAQFQAARFDSHYLETWHILLAMARVDQSLAGLVLSEFDAKVAVEEYEAAAILAIGKNPKGQVSHVD
FKPQSKTLTNVLQFAQAISQITKDPEVGSEHVLFAMLLNPDIMASRLLEMAGYRIKDKGNGEPRLADLRKAIEIHAGYSK
ETIKTIHELRKPKKTKVQGTFSDMMKPPSTTGDLADFTRDLTEMAKQGLLEPVIGRDAEVSRMIQVLSRKTKNNPVLVGD
AGVGKTALAYGLAQRIVNGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIIDDIEADGKIILFVDELHTIMGSGS
GIDSTLDAANILKPALSRGTLHMVGATTQEEYQKHIEKDAALSRRFAKILIEEPNLEDAYQILLGLKTSYETYHNVSISD
QAVHTAVKMAHRYLTSKNLPDSAIDLLDEASATVQSMVKKSSSEIITPIDQALLDGDIKKVSRLLAKEAKGQTRRPRPVT
EDDIMATLSKLSGIPLEKLSQADSKKYLNLEKELHKRVIGQEDAVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKT
ELAKALAEVLFDDASALIRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQ
VLDDGMLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGVKGVSHDHQAMEKRILEELKKAYRPEFINRIDEKVVFH
SLTQENMREVVKIMVQPLIASLAEKGITLKFQPMALKYLSEEGYDVEMGARPLRRTLQTQVEDKLSELILAGDLASGHTL
KIGLSHGKLSFNVG

Nucleotide

• Length: 2445 bp

>NTDB_id=64768 SCAZ3_RS03790 WP_003045629.1 830307..832751(-) (clpC) [Streptococcus canis FSL Z3-227]
ATGATCATGTATTCATTGAAGATGCAAGAAATCTTTAGGCAGGCACAGTTTCAAGCAGCCCGCTTTGACAGCCACTACCT
AGAAACTTGGCATATCTTGTTAGCCATGGCTAGAGTTGACCAGTCCTTAGCAGGTCTAGTGCTAAGTGAATTTGATGCTA
AAGTTGCAGTGGAAGAATACGAAGCTGCCGCTATTTTAGCTATAGGAAAAAATCCTAAAGGTCAGGTGTCACACGTGGAT
TTCAAGCCTCAATCCAAGACCTTGACGAATGTGTTACAGTTTGCGCAGGCTATTAGTCAAATCACTAAAGACCCAGAAGT
CGGCTCTGAACATGTGCTCTTTGCCATGCTACTCAATCCTGATATTATGGCAAGTCGTCTCTTGGAAATGGCTGGGTATC
GCATCAAAGATAAAGGAAATGGGGAACCTCGCTTAGCTGATTTGCGAAAGGCCATTGAGATTCACGCAGGTTATAGCAAA
GAAACCATTAAGACTATCCATGAGTTACGCAAACCAAAGAAAACGAAGGTTCAAGGAACCTTCTCAGATATGATGAAACC
ACCAAGCACGACGGGTGATTTGGCTGACTTCACCAGAGATTTGACCGAGATGGCAAAACAAGGTCTGCTAGAGCCTGTCA
TTGGTCGTGATGCCGAAGTATCTCGCATGATTCAAGTGCTCAGTCGTAAAACCAAAAACAATCCTGTTCTTGTTGGAGAT
GCAGGGGTTGGTAAAACTGCCCTTGCCTATGGTCTTGCCCAACGTATTGTGAATGGAGCCATTCCTTATGAACTGCAAGA
CATGCGCGTCCTCGAATTGGACATGATGAGCGTCGTTGCGGGGACACGTTTTCGTGGTGATTTTGAAGAACGCATGAACC
AGATTATTGATGACATTGAAGCAGATGGCAAGATTATCCTCTTTGTGGATGAATTGCATACCATTATGGGGTCAGGAAGC
GGTATTGATAGCACACTTGATGCTGCTAATATTTTGAAACCAGCCCTATCTCGTGGCACCCTTCACATGGTCGGAGCAAC
AACGCAGGAAGAGTACCAAAAACATATTGAAAAGGACGCCGCTCTTTCTCGCCGCTTTGCCAAAATTTTAATTGAAGAGC
CTAACCTAGAAGACGCCTATCAGATTTTACTAGGTTTGAAGACTTCCTATGAAACCTACCATAATGTGTCAATTTCTGAT
CAGGCAGTGCATACAGCTGTTAAAATGGCGCATCGCTACCTAACTAGTAAAAATCTTCCAGATTCAGCCATCGATTTGTT
GGACGAAGCTAGCGCTACAGTCCAAAGCATGGTTAAAAAATCAAGTTCGGAAATCATCACACCAATAGATCAGGCACTTC
TTGACGGTGATATAAAAAAGGTTTCACGTCTTTTGGCCAAAGAAGCTAAGGGGCAGACGAGAAGGCCAAGGCCAGTAACA
GAAGACGATATTATGGCAACCCTGAGCAAATTATCAGGGATTCCATTGGAAAAACTCAGTCAGGCTGATAGCAAAAAATA
CCTCAATCTTGAAAAAGAGTTGCACAAGCGCGTGATTGGACAAGAAGACGCTGTTTCAGCCATTTCTAGAGCAATCCGTC
GTAATCAATCGGGTATTCGCACTGGTAAACGTCCAATTGGTTCTTTCATGTTCCTTGGACCTACTGGTGTTGGGAAGACT
GAATTGGCTAAAGCTTTGGCAGAAGTCCTCTTTGATGACGCGTCAGCCCTTATCCGCTTTGACATGTCAGAGTATATGGA
AAAATTTGCGGCATCTCGCCTTAATGGAGCGCCTCCAGGCTATGTTGGTTACGATGAAGGCGGTGAATTAACAGAGAAGG
TCAGAAATAAGCCTTATTCTGTCCTCCTCTTTGACGAGGTGGAAAAAGCCCACCCTGACATTTTCAACGTGCTCTTACAA
GTGCTTGATGACGGTATGTTGACAGATAGCCGTGGGCGTAAGGTGGACTTCTCAAACACCATTATTATCATGACTAGTAA
TCTAGGGGCAACAGCTCTGCGGGATGATAAAACAGTTGGCTTTGGGGTAAAAGGGGTCAGCCATGACCACCAAGCCATGG
AAAAACGGATTTTGGAAGAATTGAAAAAAGCTTATCGACCAGAATTTATCAACCGAATTGATGAAAAGGTTGTCTTCCAT
AGCCTTACCCAAGAGAATATGAGGGAAGTGGTTAAGATTATGGTGCAGCCATTGATTGCTAGTTTAGCAGAAAAAGGCAT
TACCCTCAAATTCCAGCCAATGGCTCTCAAGTACCTTTCAGAGGAAGGCTATGATGTGGAAATGGGTGCTCGTCCATTGC
GCCGTACTTTGCAAACGCAGGTAGAAGACAAACTATCCGAATTGATTCTTGCTGGTGACTTGGCAAGTGGTCACACCCTG
AAAATTGGGCTTTCCCATGGCAAACTCAGCTTTAACGTTGGGTAA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (722-801)

• AAA domain (Cdc48 subfamily) (AAA_2) (544-715)

• ATPase family associated with various cellular activities (AAA) (AAA) (236-368)

• AAA lid domain (AAA_lid_9) (376-453)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (95-132)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (15-53)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus mutans UA159	76.015	99.877	0.759
clpC	Streptococcus thermophilus LMG 18311	72.181	100	0.724
clpC	Streptococcus thermophilus LMD-9	72.181	100	0.724
clpC	Streptococcus pneumoniae TIGR4	65.725	100	0.657
clpC	Streptococcus pneumoniae Rx1	65.725	100	0.657
clpC	Streptococcus pneumoniae D39	65.725	100	0.657
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	48.449	100	0.499
clpC	Bacillus subtilis subsp. subtilis str. 168	43.87	100	0.448