Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   L1O91_RS09560 Genome accession   NZ_CP091066
Coordinates   1953715..1954758 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain UMCG579     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1948715..1959758
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L1O91_RS09530 (L1O91_09530) - 1949139..1950395 (-) 1257 WP_257552941.1 aminopeptidase -
  L1O91_RS09535 (L1O91_09535) - 1950398..1950598 (-) 201 WP_000180460.1 DUF1128 family protein -
  L1O91_RS09540 (L1O91_09540) - 1950745..1951209 (+) 465 WP_054189636.1 low molecular weight protein-tyrosine-phosphatase -
  L1O91_RS09545 (L1O91_09545) - 1951216..1951491 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  L1O91_RS09550 (L1O91_09550) - 1951769..1952986 (+) 1218 WP_000037088.1 YihY/virulence factor BrkB family protein -
  L1O91_RS09555 (L1O91_09555) vraR 1953096..1953725 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  L1O91_RS09560 (L1O91_09560) vraS 1953715..1954758 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  L1O91_RS09565 (L1O91_09565) liaF 1954755..1955456 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  L1O91_RS09570 (L1O91_09570) - 1955471..1955857 (-) 387 WP_001110179.1 hypothetical protein -
  L1O91_RS09575 (L1O91_09575) map 1956074..1956832 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  L1O91_RS09580 (L1O91_09580) - 1957650..1958636 (+) 987 WP_054189634.1 aromatic acid exporter family protein -
  L1O91_RS09585 (L1O91_09585) - 1959145..1959558 (-) 414 WP_077446671.1 hypothetical protein -
  L1O91_RS09590 (L1O91_09590) - 1959587..1959697 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=647457 L1O91_RS09560 WP_001017131.1 1953715..1954758(-) (vraS) [Staphylococcus aureus strain UMCG579]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=647457 L1O91_RS09560 WP_001017131.1 1953715..1954758(-) (vraS) [Staphylococcus aureus strain UMCG579]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTTATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACGGTTGGTATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAACGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACAAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTCCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCACTTGGTTTAAAAG
ACAAATCATTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1