Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | OHQ36_RS02290 | Genome accession | NZ_CP107860 |
| Coordinates | 457598..460141 (+) | Length | 847 a.a. |
| NCBI ID | WP_330302045.1 | Uniprot ID | - |
| Organism | Streptomyces sp. NBC_00500 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 452598..465141
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OHQ36_RS02275 (OHQ36_02250) | - | 453057..455111 (+) | 2055 | WP_330302043.1 | DUF4139 domain-containing protein | - |
| OHQ36_RS02280 (OHQ36_02255) | - | 455120..456682 (+) | 1563 | WP_330302044.1 | mucoidy inhibitor MuiA family protein | - |
| OHQ36_RS02285 (OHQ36_02260) | - | 456867..457229 (-) | 363 | Protein_455 | alpha-ketoglutarate-dependent dioxygenase AlkB | - |
| OHQ36_RS02290 (OHQ36_02265) | clpC | 457598..460141 (+) | 2544 | WP_330302045.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| OHQ36_RS02295 (OHQ36_02270) | - | 460483..460629 (-) | 147 | Protein_457 | IS1380 family transposase | - |
| OHQ36_RS02300 (OHQ36_02275) | - | 460634..461236 (-) | 603 | WP_330302046.1 | sugar O-acetyltransferase | - |
| OHQ36_RS02305 (OHQ36_02280) | - | 461722..462201 (-) | 480 | WP_330302048.1 | hypothetical protein | - |
| OHQ36_RS02310 (OHQ36_02285) | - | 462198..462323 (-) | 126 | Protein_460 | IS256 family transposase | - |
| OHQ36_RS02315 (OHQ36_02290) | - | 462498..462932 (-) | 435 | WP_327326263.1 | VOC family protein | - |
| OHQ36_RS02320 (OHQ36_02295) | - | 463401..463535 (-) | 135 | WP_330302049.1 | hypothetical protein | - |
| OHQ36_RS02325 (OHQ36_02300) | - | 463580..464317 (-) | 738 | WP_330302050.1 | VOC family protein | - |
Sequence
Protein
Download Length: 847 a.a. Molecular weight: 92847.12 Da Isoelectric Point: 5.0278
>NTDB_id=647038 OHQ36_RS02290 WP_330302045.1 457598..460141(+) (clpC) [Streptomyces sp. NBC_00500]
MTDGQRGPENGPDPLGDFLSHFLGTGQGGEPPDPRRIDFSRLLSGPARQLVSVAASYAAQHGSTDLDTEHLLRAALSTEP
TRRMVTRAGADPDALAAEIDRQVGEGPPRQFIAVTPAVKRALLDAHEIARSTGASYIGPEHVLVALAANRDSAAGQMLNA
AHFSPPVGARDGLTPAPGSAGQRTGPGERNTPNLDKFGRDLTDLAGEGRIDPVIGRDAEIEQTIEVLARRSKNNPVMIGE
AGVGKTAIVEGLAQRIADGEVPDILLGRRVVQLDLSGVVAGTRFRGDFEERLTGLIDEIRAHSDELIIFIDELHTVVGAG
GGSEGGPMDASNMLKPALARGELHVVGASTLEEYRRYIEKDAALARRFQPVLIPEPSPADAVEILRGLQDRYEAHHQVRY
TDEALLAAVELSDRYLTDRYLPDKAIDLMDQAGARVRLRSSTRGTNVRALEREVEQVTRDKDQAVATEQYERATELRDRL
ADLQQRIAEGNHAQQPRSHVTEVTVEDIADIVSRQTGIPVSSLTQEERDRLLSLEEHLHQRVIGQDEAVTAVADAVLRSR
AGLADASRPIGSFLFLGPTGVGKTELARALAEALFGSEDRMIRLDMSEYQERHTVSRLVGAPPGYVGFEEAGQFTEAVRR
NPYSLLLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTIDFKNTVIVMTSNLGSQAITGRGGAMGFGAGDADADEQARRE
RVLRPLREHFRPEFLNRIDEIVIFRQLADQQLRQITNMLLDDSRRRLHAQDVTVDVTMAAVEWLAQRGYQPEYGARPLRR
TIQREVDNRLSRMLLDGNLQPHSRLRIDVADGELTIHKEEEPQGPAS
MTDGQRGPENGPDPLGDFLSHFLGTGQGGEPPDPRRIDFSRLLSGPARQLVSVAASYAAQHGSTDLDTEHLLRAALSTEP
TRRMVTRAGADPDALAAEIDRQVGEGPPRQFIAVTPAVKRALLDAHEIARSTGASYIGPEHVLVALAANRDSAAGQMLNA
AHFSPPVGARDGLTPAPGSAGQRTGPGERNTPNLDKFGRDLTDLAGEGRIDPVIGRDAEIEQTIEVLARRSKNNPVMIGE
AGVGKTAIVEGLAQRIADGEVPDILLGRRVVQLDLSGVVAGTRFRGDFEERLTGLIDEIRAHSDELIIFIDELHTVVGAG
GGSEGGPMDASNMLKPALARGELHVVGASTLEEYRRYIEKDAALARRFQPVLIPEPSPADAVEILRGLQDRYEAHHQVRY
TDEALLAAVELSDRYLTDRYLPDKAIDLMDQAGARVRLRSSTRGTNVRALEREVEQVTRDKDQAVATEQYERATELRDRL
ADLQQRIAEGNHAQQPRSHVTEVTVEDIADIVSRQTGIPVSSLTQEERDRLLSLEEHLHQRVIGQDEAVTAVADAVLRSR
AGLADASRPIGSFLFLGPTGVGKTELARALAEALFGSEDRMIRLDMSEYQERHTVSRLVGAPPGYVGFEEAGQFTEAVRR
NPYSLLLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTIDFKNTVIVMTSNLGSQAITGRGGAMGFGAGDADADEQARRE
RVLRPLREHFRPEFLNRIDEIVIFRQLADQQLRQITNMLLDDSRRRLHAQDVTVDVTMAAVEWLAQRGYQPEYGARPLRR
TIQREVDNRLSRMLLDGNLQPHSRLRIDVADGELTIHKEEEPQGPAS
Nucleotide
Download Length: 2544 bp
>NTDB_id=647038 OHQ36_RS02290 WP_330302045.1 457598..460141(+) (clpC) [Streptomyces sp. NBC_00500]
ATGACCGACGGCCAGCGGGGTCCCGAGAACGGTCCGGACCCCCTCGGAGACTTCCTCTCGCACTTTCTCGGCACCGGACA
AGGTGGAGAACCGCCCGACCCGCGGCGCATCGACTTCAGCCGTCTGTTGAGCGGTCCCGCACGGCAACTCGTCTCCGTCG
CAGCGTCCTATGCCGCCCAGCACGGGAGTACCGACCTCGACACGGAACACCTCTTGCGGGCCGCGCTCTCCACCGAGCCG
ACTCGTCGCATGGTCACGCGAGCGGGCGCCGATCCCGACGCGCTCGCCGCCGAAATCGACCGGCAGGTCGGGGAGGGGCC
GCCACGCCAGTTCATCGCCGTCACCCCGGCGGTCAAGCGCGCTCTGCTCGACGCCCATGAAATCGCGCGCTCCACCGGCG
CCTCCTACATCGGCCCGGAACACGTGTTGGTGGCACTCGCCGCCAACCGCGACTCCGCAGCGGGGCAAATGCTCAACGCC
GCGCACTTCTCGCCGCCCGTCGGCGCCCGGGACGGCCTCACGCCCGCGCCCGGAAGCGCCGGCCAGCGTACCGGCCCCGG
CGAGCGGAACACCCCCAACCTGGACAAGTTCGGGCGCGACCTCACCGACCTGGCTGGGGAGGGCCGTATCGACCCGGTCA
TCGGCCGCGACGCGGAGATCGAACAGACCATTGAGGTACTCGCCCGCCGAAGCAAGAACAATCCCGTCATGATCGGCGAA
GCCGGAGTGGGCAAGACCGCCATCGTCGAGGGACTGGCCCAGCGCATCGCGGACGGCGAGGTGCCGGACATCCTGCTGGG
TCGGCGTGTCGTCCAGCTCGACCTCTCAGGAGTCGTCGCCGGTACCCGCTTCCGTGGGGACTTCGAGGAACGGCTCACCG
GCCTCATCGACGAAATCCGCGCCCACTCGGACGAGCTGATCATCTTCATTGACGAACTTCATACCGTCGTCGGGGCGGGC
GGCGGCTCCGAGGGCGGACCGATGGACGCGAGCAATATGCTCAAGCCCGCTCTGGCCCGCGGCGAACTCCATGTCGTGGG
GGCCAGCACGCTCGAGGAGTACCGCCGATACATCGAGAAGGACGCCGCGCTCGCCCGCCGGTTCCAGCCGGTTCTGATCC
CCGAGCCCAGTCCGGCGGACGCCGTCGAGATCCTGCGGGGTCTCCAGGACCGCTACGAAGCCCATCACCAGGTCCGCTAC
ACCGACGAGGCACTGCTCGCCGCCGTCGAGCTGTCCGACCGCTATCTCACCGACCGCTACCTGCCCGACAAAGCGATCGA
CCTCATGGACCAGGCCGGCGCACGGGTCCGGCTGCGCTCCTCCACCCGCGGCACCAACGTCCGCGCCCTGGAACGCGAAG
TGGAGCAGGTCACCCGGGACAAGGACCAGGCCGTCGCCACCGAGCAGTACGAGCGGGCGACCGAGCTGCGCGACCGACTC
GCCGACCTCCAGCAGCGGATCGCCGAGGGGAACCACGCACAGCAGCCCCGCAGCCATGTCACCGAGGTCACCGTCGAAGA
CATAGCCGACATCGTGTCCCGTCAGACCGGAATTCCCGTCAGCAGCCTCACCCAGGAGGAGCGGGACCGGCTGCTGAGCC
TGGAAGAACATCTGCACCAGCGCGTCATCGGCCAGGACGAAGCGGTGACCGCCGTCGCCGACGCCGTCCTGCGCTCGCGG
GCCGGTCTGGCCGACGCCAGCCGCCCGATCGGGAGCTTCCTCTTCCTCGGCCCCACCGGCGTCGGCAAGACCGAACTCGC
CCGCGCGCTCGCGGAGGCGCTCTTCGGGAGCGAGGACCGGATGATCCGTCTCGACATGAGTGAGTACCAGGAACGGCACA
CCGTCAGCCGTCTGGTCGGCGCTCCCCCCGGCTACGTCGGCTTCGAGGAGGCCGGACAGTTCACCGAAGCGGTGCGAAGG
AACCCCTACTCGCTGCTGCTCCTGGACGAGATCGAGAAGGCGCACCCCGACGTCTTCAACATCCTGCTGCAGGTGCTCGA
CGACGGGCGGCTCACCGACTCCCAGGGCCGCACGATCGATTTCAAGAACACCGTCATCGTCATGACCAGCAACCTCGGTT
CGCAGGCCATTACCGGTCGCGGCGGCGCGATGGGATTCGGTGCCGGCGACGCGGACGCCGACGAGCAGGCCCGCCGCGAG
CGGGTGCTGCGCCCCCTGCGCGAACACTTCCGGCCGGAGTTCCTCAATCGCATCGACGAGATCGTGATCTTCCGCCAACT
CGCCGACCAGCAGCTACGGCAGATCACCAACATGCTGCTGGACGACTCCAGGCGCCGGCTCCACGCCCAGGACGTCACCG
TCGATGTCACCATGGCTGCTGTCGAATGGCTCGCCCAACGCGGCTACCAGCCCGAATACGGTGCCCGCCCGTTGCGCCGT
ACGATCCAGCGCGAGGTCGACAACCGGCTCTCCCGCATGCTGCTCGACGGCAACCTGCAGCCACACAGCCGCCTCCGGAT
CGACGTCGCCGACGGTGAGCTGACCATCCACAAGGAGGAAGAACCACAGGGCCCCGCGAGCTGA
ATGACCGACGGCCAGCGGGGTCCCGAGAACGGTCCGGACCCCCTCGGAGACTTCCTCTCGCACTTTCTCGGCACCGGACA
AGGTGGAGAACCGCCCGACCCGCGGCGCATCGACTTCAGCCGTCTGTTGAGCGGTCCCGCACGGCAACTCGTCTCCGTCG
CAGCGTCCTATGCCGCCCAGCACGGGAGTACCGACCTCGACACGGAACACCTCTTGCGGGCCGCGCTCTCCACCGAGCCG
ACTCGTCGCATGGTCACGCGAGCGGGCGCCGATCCCGACGCGCTCGCCGCCGAAATCGACCGGCAGGTCGGGGAGGGGCC
GCCACGCCAGTTCATCGCCGTCACCCCGGCGGTCAAGCGCGCTCTGCTCGACGCCCATGAAATCGCGCGCTCCACCGGCG
CCTCCTACATCGGCCCGGAACACGTGTTGGTGGCACTCGCCGCCAACCGCGACTCCGCAGCGGGGCAAATGCTCAACGCC
GCGCACTTCTCGCCGCCCGTCGGCGCCCGGGACGGCCTCACGCCCGCGCCCGGAAGCGCCGGCCAGCGTACCGGCCCCGG
CGAGCGGAACACCCCCAACCTGGACAAGTTCGGGCGCGACCTCACCGACCTGGCTGGGGAGGGCCGTATCGACCCGGTCA
TCGGCCGCGACGCGGAGATCGAACAGACCATTGAGGTACTCGCCCGCCGAAGCAAGAACAATCCCGTCATGATCGGCGAA
GCCGGAGTGGGCAAGACCGCCATCGTCGAGGGACTGGCCCAGCGCATCGCGGACGGCGAGGTGCCGGACATCCTGCTGGG
TCGGCGTGTCGTCCAGCTCGACCTCTCAGGAGTCGTCGCCGGTACCCGCTTCCGTGGGGACTTCGAGGAACGGCTCACCG
GCCTCATCGACGAAATCCGCGCCCACTCGGACGAGCTGATCATCTTCATTGACGAACTTCATACCGTCGTCGGGGCGGGC
GGCGGCTCCGAGGGCGGACCGATGGACGCGAGCAATATGCTCAAGCCCGCTCTGGCCCGCGGCGAACTCCATGTCGTGGG
GGCCAGCACGCTCGAGGAGTACCGCCGATACATCGAGAAGGACGCCGCGCTCGCCCGCCGGTTCCAGCCGGTTCTGATCC
CCGAGCCCAGTCCGGCGGACGCCGTCGAGATCCTGCGGGGTCTCCAGGACCGCTACGAAGCCCATCACCAGGTCCGCTAC
ACCGACGAGGCACTGCTCGCCGCCGTCGAGCTGTCCGACCGCTATCTCACCGACCGCTACCTGCCCGACAAAGCGATCGA
CCTCATGGACCAGGCCGGCGCACGGGTCCGGCTGCGCTCCTCCACCCGCGGCACCAACGTCCGCGCCCTGGAACGCGAAG
TGGAGCAGGTCACCCGGGACAAGGACCAGGCCGTCGCCACCGAGCAGTACGAGCGGGCGACCGAGCTGCGCGACCGACTC
GCCGACCTCCAGCAGCGGATCGCCGAGGGGAACCACGCACAGCAGCCCCGCAGCCATGTCACCGAGGTCACCGTCGAAGA
CATAGCCGACATCGTGTCCCGTCAGACCGGAATTCCCGTCAGCAGCCTCACCCAGGAGGAGCGGGACCGGCTGCTGAGCC
TGGAAGAACATCTGCACCAGCGCGTCATCGGCCAGGACGAAGCGGTGACCGCCGTCGCCGACGCCGTCCTGCGCTCGCGG
GCCGGTCTGGCCGACGCCAGCCGCCCGATCGGGAGCTTCCTCTTCCTCGGCCCCACCGGCGTCGGCAAGACCGAACTCGC
CCGCGCGCTCGCGGAGGCGCTCTTCGGGAGCGAGGACCGGATGATCCGTCTCGACATGAGTGAGTACCAGGAACGGCACA
CCGTCAGCCGTCTGGTCGGCGCTCCCCCCGGCTACGTCGGCTTCGAGGAGGCCGGACAGTTCACCGAAGCGGTGCGAAGG
AACCCCTACTCGCTGCTGCTCCTGGACGAGATCGAGAAGGCGCACCCCGACGTCTTCAACATCCTGCTGCAGGTGCTCGA
CGACGGGCGGCTCACCGACTCCCAGGGCCGCACGATCGATTTCAAGAACACCGTCATCGTCATGACCAGCAACCTCGGTT
CGCAGGCCATTACCGGTCGCGGCGGCGCGATGGGATTCGGTGCCGGCGACGCGGACGCCGACGAGCAGGCCCGCCGCGAG
CGGGTGCTGCGCCCCCTGCGCGAACACTTCCGGCCGGAGTTCCTCAATCGCATCGACGAGATCGTGATCTTCCGCCAACT
CGCCGACCAGCAGCTACGGCAGATCACCAACATGCTGCTGGACGACTCCAGGCGCCGGCTCCACGCCCAGGACGTCACCG
TCGATGTCACCATGGCTGCTGTCGAATGGCTCGCCCAACGCGGCTACCAGCCCGAATACGGTGCCCGCCCGTTGCGCCGT
ACGATCCAGCGCGAGGTCGACAACCGGCTCTCCCGCATGCTGCTCGACGGCAACCTGCAGCCACACAGCCGCCTCCGGAT
CGACGTCGCCGACGGTGAGCTGACCATCCACAAGGAGGAAGAACCACAGGGCCCCGCGAGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
50.563 |
94.333 |
0.477 |
| clpC | Streptococcus pneumoniae TIGR4 |
43.675 |
98.937 |
0.432 |
| clpC | Streptococcus pneumoniae Rx1 |
43.452 |
99.174 |
0.431 |
| clpC | Streptococcus pneumoniae D39 |
43.452 |
99.174 |
0.431 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
44.789 |
95.159 |
0.426 |
| clpC | Streptococcus mutans UA159 |
42.424 |
97.403 |
0.413 |
| clpC | Streptococcus thermophilus LMD-9 |
46.103 |
89.374 |
0.412 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.707 |
89.374 |
0.409 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.841 |
81.464 |
0.398 |
| clpE | Streptococcus mutans UA159 |
53.344 |
74.144 |
0.396 |
| clpE | Streptococcus pneumoniae TIGR4 |
49.627 |
79.221 |
0.393 |
| clpE | Streptococcus pneumoniae Rx1 |
49.627 |
79.221 |
0.393 |
| clpE | Streptococcus pneumoniae D39 |
49.627 |
79.221 |
0.393 |
| clpE | Streptococcus pneumoniae R6 |
49.627 |
79.221 |
0.393 |